KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10013039mg
Entry
EUTSA_v10013039mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13]
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eus03009]
    EUTSA_v10013039mg
Ribosome biogenesis [BR:eus03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    EUTSA_v10013039mg
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII
Other DBs
NCBI-GeneID: 18018363
NCBI-ProteinID: XP_006399006
UniProt: V4L9V5
Position
Unknown
AA seq 595 aa
MDSSPTTNKALTGTRFSDLEPPLSEDIIEVLEKSGFEFCTPVQAATIPLLCRHKDVAVDA
ATGSGKTLAFLLPLIEILRRSTSYPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLPNV
NSVLLVGGREVKADMKTIEEEGGNLLIGTPGRLSDIMERMEILDFRNLEILVLDEADRLL
EMGFQKQVNSIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSEPSQQL
TNSKIPSGLHLEYLECEADKKSSQLVDLLIKNENKKLIVYFMTCASVDYWGLVLSKIPAL
KSISLIPIHGDMKQNARDKALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPN
MFNHRVGRTARLGRQGRAIVFLLPKEEDYVEFMRRRGVSCQERKCSEEASDVIPIIRSLA
MKDRAVLEKGLKAFVSFVRAYKEHHCSYIFRWKGLEIGKLAMGYGLLYLPSMSEVKQHRL
SSEGFTPVEGVKFEDIKFKDKSREKQRKQNLQARKEKRQEEKREKGKKFSKKAVDASATT
DSNKASRKLTGKQRQTIQTAEDEEEMARDYRFLKKLKKGSIKEDEFAKLTGADDF
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggattcatcgccgaccactaacaaagctttaacggggacgcgtttctccgacctcgaa
cctccgctctccgaagatatcatcgaggtgcttgaaaagtccggtttcgagttctgcact
ccggttcaggccgcgacgatccctttactctgccgccacaaggatgttgccgtcgacgct
gccaccggttctggaaaaaccctagctttcctcctccctctcatagagattctccgtcga
tccacctcctaccctccgaagcctcaccaggttatgggggtgataatatcgccaacaaga
gagctatcaacgcagatatataacgtggcacagccgtttgtttcgactttgcctaatgtg
aactctgtgctgcttgttggaggccgagaggtgaaagctgacatgaagactattgaagag
gaaggaggcaatctcttgattggcacgcctggaaggctctctgatataatggaacgaatg
gagattctggatttcagaaatcttgagattcttgtcttagatgaggcagacaggcttttg
gagatgggattccaaaagcaggtgaatagcattatatctcgcttgccaaagcaacggagg
actggcctcttttcagctacacaaacagaaggcgttgaagagctggccaaggctgggctt
aggaatcctgtgagagttgaagttcgagctgagtcgaagtcggaaccatcccagcagtta
acaaactcgaaaataccttctggtctgcaccttgagtatttggaatgcgaagcagataag
aaatcatcacaactagtagatctcctcatcaagaatgaaaataaaaagcttatagtatac
tttatgacctgtgcttccgttgattactggggactcgtactttcaaaaattcctgccctg
aagtcgatatctttaatccccatccatggggatatgaagcagaatgcaagagacaaggca
ttagcttcgtttactgaagcatcaagcggtgtccttttgtgcacagatgtcgctgcacgt
ggacttgatattccaggcattgattacgtagttcagtatgatcccccacaagacccaaat
atgttcaaccatagggtcggcagaactgcaagattgggaagacaagggagggccattgtt
tttttactgcccaaggaagaagactatgtagagtttatgcgcagaagaggggtctcttgt
caagagagaaaatgctctgaggaagcatctgacgtcatcccgattatacgttcactagcc
atgaaggaccgggcagtgttggagaagggattaaaggcatttgtttcctttgtccgtgct
tataaggagcatcactgctcttatattttcagatggaaaggccttgaaatcggaaagtta
gcaatggggtatggcctcttgtatcttccttcaatgtctgaagttaaacaacacagactt
tccagtgagggtttcacacccgttgaaggcgtcaagtttgaggacataaaattcaaggac
aaatctcgggagaaacaaagaaagcaaaacttacaagcaaggaaagagaaacggcaagaa
gagaaaagagagaaaggcaagaaattctcgaaaaaggcggttgatgcttccgctacaact
gattcgaacaaagcgtcgagaaagttaacaggaaaacagagacaaaccatccaaacagcc
gaagatgaagaagaaatggctcgagattatcggtttctgaaaaagctgaagaaagggtca
attaaagaagatgaatttgcaaaacttacaggagctgatgatttttaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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