KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10016932mg
Entry
EUTSA_v10016932mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eus04131]
    EUTSA_v10016932mg
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10016932mg
Enzymes [BR:eus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     EUTSA_v10016932mg
Membrane trafficking [BR:eus04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    EUTSA_v10016932mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    EUTSA_v10016932mg
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-RING_UBOX zf-RING_11 zf-rbx1 zf-C3HC4 zf-C3HC4_3 zf-RING_5 Rad50_zn_hook zf-ANAPC11 zf-Nse DZR_2 DUF5318 zf-FPG_IleRS zf-RING_16
Other DBs
NCBI-GeneID: 18027569
NCBI-ProteinID: XP_006411351
UniProt: V4M8X9
Position
Unknown
AA seq 325 aa
MSSGRNTHWCHRCQRAVRLHGQEPVCSYCGGGFVEELDMAQVSPFDMLRAQREVVERDPT
FDLMDAFSALVRNRLSERSRDREIRGRAISSGPENFPGLAPLLIFGGQVPYRLSGDTAVE
ALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSSIDALPTIKIAQ
RHLRSSDSNCPVCKDEFELGAEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSTRGS
SSSQNRTTTRNYSSSSISSNNRESSSERRNPFSSFWPFRSSGSSSSSTQNRGGSRNSDTT
DENHNYHHQQQQQSHMGYSGWPFDY
NT seq 978 nt   +upstreamnt  +downstreamnt
atgtctagcggtcgaaacacccactggtgtcatagatgccagcgtgctgtccggcttcac
ggccaagagcctgtatgctcttattgtggaggaggattcgttgaagaacttgatatggct
caagttagcccatttgatatgttaagagctcagagggaggttgtagaacgtgatccgact
tttgatctcatggatgctttctcagccttggtgaggaaccgtttaagtgaaaggagccgc
gaccgagaaatcagaggaagagccatcagttcgggtcctgaaaactttcctggcctggct
cctttgttgatctttggtggtcaggtcccttatagactatctggagacactgcagtcgaa
gctctcttcaatggtggctcgcctggaattggcatcacacgtggtaacaccggcgattac
ttctttggccctggtcttgaagagttattcgagcagctttcagccggcactactcgccgt
ggcccaccacctgcaccaagatcatcaatagatgcattgccaaccatcaagatcgcgcag
aggcatctgaggtcgtcggactcaaactgtcctgtgtgcaaagacgagttcgaattggga
gcagaagcgaagcagatgccgtgtaaccacatctatcattctgactgcatcgtcccgtgg
ctggttcagcacaactcatgcccagtctgtcgccaagagctaccttcaactagaggatct
tcaagcagtcaaaacagaaccaccaccagaaactacagtagtagtagtatcagtagcaac
aatcgtgagagcagcagtgaaagaaggaatcctttctcgtccttctggccatttcgttcg
tccggttcaagctcaagctccactcaaaaccgtggaggatcaagaaactcggatacaacc
gatgagaatcataactaccatcatcagcaacagcaacaatcacatatgggttacagtggc
tggccttttgattactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (29)   

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