KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10019931mg
Entry
EUTSA_v10019931mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EUTSA_v10019931mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10019931mg
Enzymes [BR:eus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EUTSA_v10019931mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     EUTSA_v10019931mg
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 18024571
NCBI-ProteinID: XP_006406653
UniProt: V4NNP3
Position
Unknown
AA seq 1169 aa
MTEMDIEEIEAAGEIDLSDLGEPFLQSFCKKAATSFFEEYGLISHQLNSYNFFIQHGLQN
VFESFGEMVVEPSFDPTKNKDDEWRYATVKFGEVSIEKPSFFSDDKELEFLPWHARLQNM
TYSARMSVNVEVEVFIKKVVKRDKFKTGQDEYVEKQILHKRTEGIPIGRIPVMVKSLLCN
TVEKGKNGENNKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSPWTVSYRSEMK
RQRFIVRLSEDPKAEDYKRREKILTVYFLSTEIPVWVLFFALGVRSDKEAIDLIAFEGDD
ASITNSLIASIQEADAVCEAFRHGINALGYVEEQIRSTKFPPGESVDDCLSLYLFPGLKS
LKQKARFLGYMVKCLLDAYAGKRKCENRDSFRNKRIELAGELLERELRVHLAHARRTMTK
AMQRHLTGGGDLKPIEHYLDASIITNGLSRAFSTGAWSHPFRKMERVSGVVANLGRANPL
QTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQI
LEPVVEKLFACGMEELVDDTSTPLCGKQKVLLNGDWVGLCSDSESFVAELKARRRQSELP
RQMEIKRDQDDSEVRIFTDAGRLLRPLLVVENLHKLKQDKPAQYAFEHLLDQGILELIGI
EEEEDCNTAWGVKQLLKEPKSYTHCELDLSFLLGVSCAIVPFANHDHGRRVLYQSQKHCQ
QAIGFSSTNPDTRCDTLSQQLFYPQKPLFKTLASECLQKEVLFNGQNAIVAVNVHLGYNQ
EDSIVMNKASLERGMFRSEQIRSYKADVDSKDSEKRKKLDELVQFGKTHSKKGRVDSLDD
DGFPFLGANMQSGDIVIGRCTESGDDHSVKLKHTERGIVQKVVLSSNDDGKNFATVSLRQ
VRSPCLGDKFSSMHGQKGVLGYLEEQENFPFTMQGIVPDIVINPHAFPSRQTPGQLLEAA
LSKGIACPMQKKGSSEAYTKLIRHATPFSTPSVSEITDQLHRAGFSRWGNERVYNGRSGE
MMRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI
AHGASANLHERLFTLSDSSQMHICRTCQNVANVIERPAEGGGGKVRGPYCRLCKSPDHVV
KVYVPYGAKLLYQELFSMGVTLNFDTRLC
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgaccgaaatggacattgaagagattgaggctgctggggagatcgatctgtctgatcta
ggagaaccttttctccagagtttctgcaaaaaagccgcgacgtcgttctttgaagagtat
gggcttataagtcatcagctcaactcctacaacttcttcattcagcacgggcttcagaac
gtgtttgaatccttcggtgagatggtcgttgagccgtcttttgatccgacaaagaacaag
gacgacgagtggagatacgcaactgtgaagttcggagaagtcagcatagagaagccctcg
ttcttctcagatgacaaggagcttgagtttctcccatggcatgccaggcttcagaacatg
acatactcggctcggatgagtgtaaatgtcgaagttgaggtgttcataaaaaaagttgtt
aaaagagacaagttcaagacgggacaagatgaatatgtcgagaagcagattttacataag
agaacggagggtattccaataggcaggatacccgtgatggtgaaatctctcctttgcaac
acagtggagaaaggaaagaatggggaaaacaacaaaaagggggattgtgcttttgatcag
ggtggatattttgtcataaagggtgctgagaaggtttttattgctcaagaacagatgtgc
acaaagagactttggatttctaattcaccatggacagtctcttacaggtccgaaatgaaa
agacaaagattcattgttcgtctgtctgaggatccaaaagcagaagactataagagaagg
gagaaaatactcactgtctatttcctctcgactgagatcccagtatgggtcctgttcttt
gcgctgggtgttaggtcagacaaagaggccattgatctgatcgcttttgaaggtgatgat
gcaagcattaccaacagtctcatagcttccatccaagaagctgatgcagtttgtgaagct
tttcgccatgggatcaatgctctaggatatgttgaagagcagataagaagcacaaaattc
ccacctggcgaaagtgtggatgactgcctgagtctctatttgtttccaggcctcaagagc
ttgaagcagaaggcacgattcctgggatatatggtgaagtgccttttggacgcatatgct
gggaaaagaaaatgcgagaatcgagacagcttcagaaacaagaggattgagctagctgga
gaattgttggagagggagttaagggtgcatcttgcacatgctagaagaacaatgaccaag
gccatgcagagacacctcacgggtggtggcgatttgaagcctattgagcattatctggat
gcttccattatcacaaatgggcttagtagagccttctccaccggagcatggtctcatcct
ttcaggaagatggaaagggtttcaggagttgtcgctaatcttggccgggccaacccattg
cagactctgattgatctgaggagaacgcggcagcaagtcctgtataccggcaaggttgga
gatgctagatacccgcatccctctcactggggcagagtatgctttttgtcaactccagat
ggtgaaaattgtggtcttgtaaagaacatgtctctccttggacttgttagcactcaaatt
ttggagcctgtggtggagaaactctttgcttgtggaatggaagagctggttgacgatacc
agtacaccactgtgtgggaaacaaaaagttcttctcaatggagactgggttggattatgt
tcagattctgaatcttttgttgcggagttaaaagccaggcggcgtcaaagtgaattacct
cgccagatggaaatcaagcgagatcaagatgacagtgaggtgaggattttcactgacgct
ggtagactactccgacctctcttggttgtggaaaatctccacaagttgaaacaagataaa
cctgcacagtatgccttcgagcatcttcttgaccaagggattcttgagctgatcgggatt
gaggaagaagaagactgtaacacagcatggggagtcaaacagcttctgaaggaacctaag
agttacacacattgcgaattggacctgtccttcctgttgggtgtgagctgtgcaattgtc
ccatttgctaatcatgatcatggtaggagagttctctaccagtcccagaagcattgccaa
caagctattgggttctcatcaacgaaccctgacacccgctgtgatacgctttcccagcag
ctgttctatccccagaagccacttttcaagacactggcgtctgaatgtttacaaaaagaa
gtgctgtttaatggccagaacgctatagttgctgtgaatgttcaccttgggtacaatcaa
gaggattccattgtcatgaacaaggcttcactggaacgcggtatgttccgttcggaacag
atcaggagctacaaagcagatgttgacagtaaggactcggagaagaggaagaagctggat
gagctggttcagtttggaaagacacacagtaaaaaaggaagagtagacagccttgatgat
gacgggttcccttttcttggtgctaatatgcaaagtggcgatattgtcattggcagatgt
accgagtctggggatgatcacagtgtaaaactcaagcacactgagagaggcattgtgcaa
aaagtggtattatcatctaatgacgatgggaagaattttgctacggtttctttgagacag
gttcgttctccatgtcttggagataaattttccagtatgcatgggcagaagggtgtttta
ggctacctagaggaacaggagaattttcctttcacgatgcaaggcatagttcctgatatt
gtgataaacccgcacgctttcccttcaaggcaaacaccgggccaactcttggaggctgct
ctctccaaaggaatagcttgtcctatgcaaaagaaaggcagctctgaggcatacaccaaa
ttaatacgtcatgcaactcctttctccactcccagtgtcagtgaaatcaccgaccagctt
cacagggctggcttttcaagatggggaaacgaaagggtctacaacggaaggtcaggagag
atgatgcgttcactcatcttcatggggccaactttctaccagcgacttgtccacatgtca
gaggacaaagtcaaattcaggaacaccggaccagttcaccctctcacgcgccagccagtt
gcagacagaaagcggtttggcggaatcaagtttggagagatggagcgagactgcctaatt
gctcacggtgcttcagctaatttgcacgagcgtctcttcactctaagtgattcctcgcag
atgcatatctgcaggacatgtcaaaacgttgccaatgtgatcgagaggccagcggaaggt
ggtggagggaaggtcagaggaccttactgtagactctgcaaatctccagaccatgtggtt
aaggtttatgtgccttatggagctaagcttctgtatcaggagctcttcagcatgggcgtc
actctcaacttcgacaccagactctgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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