KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10024536mg
Entry
EUTSA_v10024536mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14304  nuclear pore complex protein Nup85
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    EUTSA_v10024536mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10024536mg
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10024536mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     EUTSA_v10024536mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    EUTSA_v10024536mg
SSDB
Motif
Pfam: Nucleopor_Nup85
Other DBs
NCBI-GeneID: 18030251
NCBI-ProteinID: XP_006412412
UniProt: V4LTC3
Position
Unknown
AA seq 720 aa
MPSITSEAGGGLGSGGELVPFSTKEKAPEVYPLHYGLKSPVHRLSISWGCGNNLRVTVLR
NPDSRDDDGEVGGNVVNVRLSGEDGEIGDAQWRRIAYGSVSPFALLQSRRNSISSLSKMD
MSPSLYQTSWWEYVMEYSRDIKSLLSSSISSPAPLIEDPKSVIKNAEEPTSLKAAWELME
IFYADKTCLSWLPERLVDWLSDYDILLSSSHPTIYSKLEDFQKELVGLQAIEDDPRYWEV
MSSALSVGWLEIVVKLLHLHGSYQLDQLGNRETENGLVEAVAVLISKMPRMRPKLEAGKF
GECFAAKPDFMKTRERWQSQMTKLECSAFWVQCAHHKTREGLRNMLKIMMGNVDCLSAAT
CNWTELFVSHLLHLRPFTKGLDGMHNLAQKCAQSKPVNTSHKLLRLLIGILGENTEVVLA
VCSKEFGSWMVAHAMELLTAGSDEGEALVHEEQRNLGGINMEELHRLVYAQVLSSHALTW
QIAPVYLSSCEKQGLGLLELLFYRQPVQDNQLLIKSLEICRLYELSNVSAKLMKISGVHH
WKHGRKGSGVFWLQQARDEHCLKVIAQQLFDSVGKSLSDESLKQWEGLVELLGSESQISG
GLDFLHKYRDFKRSLKLVHDGKAIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKLLN
WPERSLLNVTQTNLMLNKLQEVSIARLRPGFVESDLSAQAVGAVRLALATNLGRAFLEDC
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgccgagtataacttcggaagccggaggcggattgggaagcggtggagaattggtgccg
ttttcgacgaaggaaaaagctccggaggtgtatcctcttcactacggcctgaagtctccg
gttcataggctctccatctcctgggggtgtggaaacaacctacgcgtcacggttttacgg
aatccggattcacgcgatgatgacggagaagttggtggaaatgtggtaaacgtgaggctt
agcggagaggatggcgaaatcggcgacgcacagtggcgaaggatcgcctatggatcggtc
tccccgtttgcgcttttgcagagcaggagaaactcaatttccagcttgtctaagatggat
atgagcccctctctgtaccagacttcgtggtgggaatatgtaatggaatacagcagggat
attaaatctctccttagtagttcaatatcttccccagcacctttgattgaagacccaaaa
tcagtgataaagaatgctgaggaaccgacttctttaaaggccgcatgggagttgatggag
atattttatgcagacaagacatgtctttcttggttgccagaacggctcgttgattggcta
tctgattatgatatcctcctttcaagctcacatccaacaatttactcaaagctcgaggat
ttccaaaaggaacttgttggcctacaggccatcgaggatgatccaagatactgggaagtg
atgtcatctgctttatcagttggttggctagaaatagtggtgaaactgttacacttacat
ggttcttatcaactagatcagctaggaaatcgtgagacagaaaatggtctggtagaagct
gtcgctgttctcatttcaaaaatgccacggatgcgtccaaaactagaagctgggaagttt
ggtgaatgctttgcagcaaagcctgactttatgaaaacacgagaaagatggcagtctcag
atgactaaactagagtgcagtgctttctgggttcaatgtgctcaccataagacccgcgag
ggcttgagaaatatgttgaagatcatgatgggaaatgtcgattgtctctcagctgcgaca
tgtaactggacggagctttttgtttcacatttgctccatctcaggccattcacgaaggga
ctagacggcatgcataaccttgcccagaaatgtgctcagtcaaagccagttaacacttcc
cataagcttctgagactacttattggaattcttggagaaaatactgaggttgtgctggca
gtgtgttccaaagaatttggctcctggatggtggcacatgccatggaattattgacagct
ggaagcgatgaaggagaagctcttgtacatgaggagcagcgaaacttgggtggaatcaac
atggaagagctccatagacttgtttatgctcaagttctttcttctcatgctttgacttgg
cagatagctcctgtttatctatcatcgtgtgagaaacagggactaggcttattagaattg
ttgttctaccggcagccagtgcaagacaaccagttgcttattaagagtctagagatttgc
cgtctatatgaacttagtaatgtcagcgctaaacttatgaagatctctggagtgcatcac
tggaaacatgggaggaaagggtctggagttttttggctacagcaagcccgggacgaacat
tgtctcaaagtgattgcacaacagctgtttgattctgttggaaagtcattgtctgatgaa
agtctcaagcaatgggaaggcctggttgagttgctgggttccgaatcacaaatctctggt
ggtcttgattttcttcacaaatatagagacttcaagagatcactgaagctagtccatgat
ggaaaagctatagatgcggctcacgaagctgtggagagacttgtatcgctaatgaagagc
ccttctactcctcaacgcttctggcttcctcttctgcatgattcattgaagctgttgaat
tggccagaacgttcgctgttgaatgtaacacagaccaacctgatgttgaacaaactacaa
gaagtatcaattgcaaggctaaggccaggcttcgtggaatccgatttgtctgctcaagct
gtgggtgctgttagacttgctcttgcaaccaatctcggacgtgcttttctcgaagactgt
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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