KEGG   Exiguobacterium sp. U13-1: ESP131_08000
Entry
ESP131_08000      CDS       T04561                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
exu  Exiguobacterium sp. U13-1
Pathway
exu02024  Quorum sensing
exu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:exu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ESP131_08000
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ESP131_08000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:exu03019]
    ESP131_08000
   03036 Chromosome and associated proteins [BR:exu03036]
    ESP131_08000
Messenger RNA biogenesis [BR:exu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ESP131_08000
Chromosome and associated proteins [BR:exu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ESP131_08000
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AOT00205
Position
1584155..1584403
AA seq 82 aa
MKATYNIQDVFLNQLRKDAVPTTVFLISGYQLRGLIKSFDNFTVILESEGKQQLIYKHAI
STFAPARNVTLYEQEETQEVSR
NT seq 249 nt   +upstreamnt  +downstreamnt
atgaaagcgacatacaacattcaggacgtctttttaaatcaattacggaaagatgcagtc
ccgacaacagttttcttaatcagcgggtatcaattacgggggctgatcaagtcattcgat
aacttcacagtcatcttggagtcggaaggtaaacagcaattgatctacaaacacgcgatc
tcgacgttcgcaccagcgcgcaacgtgacgttatatgagcaagaagagacacaagaagtc
tctcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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