KEGG   Ficedula albicollis (collared flycatcher): 101807083
Entry
101807083         CDS       T02815                                 
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
  KO
K04836  voltage-gated sodium channel type III alpha
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:fab04040]
    101807083
Ion channels [BR:fab04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   101807083
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel IQ ATP-synt_B GPHH
Other DBs
NCBI-GeneID: 101807083
NCBI-ProteinID: XP_005049466
Position
7:20287086..20358480
AA seq 1813 aa
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQEHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINIISYFNSTM
NENGTFVNMTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQTTAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAEDKGDIDKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRLTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGHAKDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASVSSRMIPALPVNGKMHSTVDCNGVVSL
VGGPSTLTSPTGQLLPEGTTTETEIRKRRLSSYQISMEMLEESAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLF
MAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YVKKKIQEFIRKAFIRKQKSLEEIKALEELNNKKDSCISNHTAVEISKDLNYLKDGNGTT
SGVGTGSSVEKYVIDENDYMSFINNPGLTVTVPIALGESDFENLNTEEFSSESDMEESKQ
KLNASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVQKFPCCQVSIEDGKGKT
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDISDVNNYTQCVELIKSNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVKDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMIFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIVLFTGEFVLKLISLRHYYFTVGWNIFDFVVVILSIFDPDATQ
FIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGE
MDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAYRRHLLRLKVKQVSSI
YNRNKNKEGDGHIIKEIIIDKLKGNSTPEKTDESSSTTSPPSYDSVTKPDKEKYEKDKAE
KNYKGKDVRENKK
NT seq 5442 nt   +upstreamnt  +downstreamnt
atggcacaggcactgctggtaccacctggacctgaaagcttccgctattttactagagat
tctctcgcagctattgaaaagcgttctgcagaagaaaaagctaaaaagcccaagcaagaa
catacagatgatgatgatgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
actctgccatttatttatggtgacatacctccaggaatggtgtctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataagggaaaagcaatt
ttccgattcagtgccacatctgccttgtatattttaactccttttaatcccatcagaaaa
attgctatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatttatacctttgaatcacttatcaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagacccatggaactggcttgacttcagtgtcatttta
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctgaagactattgtaggagcc
ctgattcagtcagtgaagaagctctcagatgtgatgatcctgactgtgttttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcag
tggcctccagacaattctacttttgagataaacattatttcctactttaacagcacaatg
aatgaaaacggtacatttgttaacatgacagtgagcacgtttaactggaaggattacatt
gaggatgaaactcatttttacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcaatgcccagaaggatatatatgtgtgaaagctggcagaaacccc
aactatggctacacaagttttgacaccttcagttgggctttcttgtcactgtttcggcta
atgactcaggacttctgggaaaacctctatcagctgactcttcgtgctgctgggaagaca
tacatgatattttttgttctggtgatttttctgggctctttctatctgataaacctgatc
ctggctgtggtcgccatggcctatgaagagcagaatcaagcaacaatggaagaagcagag
cagaaagaggcagaatttcagcaaatgctggaacaactgaagaagcaacaagaagaagct
cagacaacagcagcagtagcagcagcatcagttgcatcaagagatttcagtggtgtaggg
ggattaggagaactcttggaaagctcttcagaagcatcaaagttgagctcaaagagtgct
aaagaaagaagaaacagaaggaagaaaagaagacagaaagaaatgtctgaagcagaggac
aaaggagatatcgataagttccctaagtctgagtcagaagacagtatcagaaggaaaagt
ttccgcttctccacagaaggaagtcaactgacatatgaaaaaaggctcacttctcctcac
cagtctctgttaagcattcgtggttctctgttctcaccaaggcgcaacagcaaaaccagc
attttcagtttcagaggtcatgcaaaggatataggatctgaaaatgactttgctgatgat
gagcacagcactcttgaagacaatgagagcagaagagattctctctttgttccaaatcga
catggagaaaggcgcaacagtaacatcagccaggccagtgtgtcatctagaatgatacca
gcccttccagtgaatgggaagatgcacagcactgtggattgcaatggggtggtttccttg
gttggaggaccttcaactctaacttcacctactggtcagcttctgccagagggcaccact
acagaaacagaaataaggaaaaggagactgagttcataccaaatttccatggaaatgctg
gaagagtctgctgcaagacaaagagcaatgagcatagcaagcatacttacaaatacaatg
gaagagcttgaagaatccagacagaaatgcccaccatgctggtacagatttgcaaatact
ttcttgatctgggactgctggagtccatggttaaaagtaaagcatgtcgtcaatttagtt
gtgatggatccatttgttgatcttgctataacaatttgcattgttttaaacactttgttt
atggccatggaacattacccaatgacagaacagtttagcagtgtcctttctgtggggaac
ttggtattcactgggatatttacagcagaaatggtactaaagatcattgccatggaccct
tactattatttccaagaaggctggaatatttttgatggtataatcgttagccttagttta
atggaacttggtcttgcaaatgttgaaggattatctgttcttcggtcattcagattgctt
cgagttttcaaattggcaaaatcttggccaaccctaaatatgctgattaagattattggc
aattctgtgggggctctggggaacctgaccctggtgctggccatcattgtgttcattttc
gctgtggttgggatgcagctgtttgggaaaagctacaaggaatgtgtctgcaagatctcc
agtgactgtgaacttcctcgctggcacatgcacgactttttccactctttcctgattgta
ttccgagtgctgtgtggagaatggatagaaacaatgtgggactgcatggaggttgcaggc
caagccatgtgccttattgttttcatgctggtcatggtgattggaaacctagtggtattg
aacctatttctggccttgctgctgagctcatttagttcagacaaccttgctgctacagat
gatgataatgaaatgaacaatctccagattgctgtggcaaggattcagaaaggcatagat
tatgtaaaaaaaaagatacaggagttcatccgaaaagccttcattagaaagcagaaatct
ttagaggaaatcaaagcacttgaagagctaaacaacaagaaagacagctgcatttccaat
catactgctgttgaaataagcaaagatctgaattatcttaaagatgggaatggaaccacc
agtggtgtaggcacaggcagcagtgtggaaaaatacgtaattgatgaaaatgattatatg
tcattcataaacaacccaggcctcactgtgacagtgcccattgcacttggagaatcagat
tttgaaaatttaaatacagaagaatttagcagcgaatctgatatggaggaaagcaaacag
aaactaaatgcatcaagctcatcagaaggcagcactgttgatattgctcctcctggagag
ggcgagcaagcagaaattgaaagtgaagaagctcttgaaccagaagcctgttttactgaa
ggttgtgtgcagaaatttccatgttgtcaagtaagtatagaagatggcaaaggaaaaact
tggtggaatcttagaaaaacctgctacagcatagttgaacacaactggttcgagactttc
attgtattcatgattcttctcagcagtggagcactagcttttgaagatatatatattgaa
caacgcaaaactatcaagaccatgctggaatacgctgacaaagtttttacgtatattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatattttactaatgcc
tggtgctggctggacttcctgattgttgatgtctcattggttagtttaatagccaatgct
ctgggctattctgaacttggtgccattaaatcgctacggactttaagagctttaagacct
ttaagagccttgtcacgatttgaaggaatgagggtggttgtaaatgcccttgtaggagca
atcccatctatcatgaatgtattgctggtatgtcttatattctggctaatcttcagcatc
atgggagtaaatctttttgctggaaaattctatcactgtgtcaacaccacaactggtgag
atgtttgatatcagtgatgtcaacaattatactcagtgtgtggaactcataaaaagcaat
caaagtgcccgatggaagaatgtgaaagtaaactttgataatgtaggagctggatatctt
gctctgctacaagtagctactttcaaaggatggatggatattatgtatgctgctgttgat
tcacgagatgtaaaagatcaacctaagtatgaggacaacttgtacatgtatctctatttt
gtcatctttatcatatttggatcattttttaccttgaaccttttcattggcgttattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgacagaagaa
cagaagaaatattacaatgcaatgaaaaaactgggatccaaaaagccacagaaacctata
cctaggccagtgaacaaattccaaggcatgatctttgattttgtaaccaaacaagtattt
gacatcagcatcatgatactcatctgccttaacatggtcacaatgatggtagaaacagat
gatcagagtaaagaaatggaaacaattttatcccggattaacctggttttcattgtcctt
ttcactggagaatttgtcctgaaattgatttcacttcgccattactacttcactgtaggc
tggaatatttttgattttgtggttgtgattctctccatatttgatcccgatgcaacacaa
ttcatagaatatagtaaattatcagattttgcagcttcattagacccacctcttctcata
gcaaagccaaacaaagtccagcttattgcaatggacctgcccatggtgagcggtgacaga
attcactgccttgacatcttgtttgctttcacaaagcgtgtgttgggggaaagcggggag
atggacgccctcagaatacagatggaagatcggtttatggcagccaatccttctaaagtc
tcctatgaaccaattacaaccacactgaaacgaaagcaggaggaggtgtctgctgtcatc
attcagcgtgcttacagacgtcaccttttaaggctaaaagttaaacaggtatctagtata
tataatagaaataaaaacaaagaaggagatggacacattataaaagagataattattgat
aaacttaaagggaactccactccagaaaaaacagatgagagttcttctacaacttcccca
ccctcttatgacagtgtaacaaagccagacaaagaaaaatatgaaaaagataaagcagaa
aagaactacaaaggcaaagatgtcagggaaaataaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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