KEGG   Ficedula albicollis (collared flycatcher): 101812191
Entry
101812191         CDS       T02815                                 
Symbol
NUP85
Name
(RefSeq) nucleoporin 85
  KO
K14304  nuclear pore complex protein Nup85
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101812191 (NUP85)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fab03019]
    101812191 (NUP85)
   03036 Chromosome and associated proteins [BR:fab03036]
    101812191 (NUP85)
Messenger RNA biogenesis [BR:fab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101812191 (NUP85)
Chromosome and associated proteins [BR:fab03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    101812191 (NUP85)
SSDB
Motif
Pfam: Nucleopor_Nup85
Other DBs
NCBI-GeneID: 101812191
NCBI-ProteinID: XP_005056155
Position
18:complement(5981346..5992662)
AA seq 685 aa
MGWHSSARTARPEHPPPAWPQAGGSGGAERGVPPRRGLGSGRRFRGERRCLSRGPPLCFA
WGPAEVLVCETLFDRAGTGHGAPSSSQVFVVRRDQDIYIQTLRKLFNESHGIFMGLQRSE
EELAGKSRKAHLVQVSKNYRSVIRACMEDMHEAAVSTQDPALQGQYSTQVSILSAMELIW
NLCEILFVEAATAGPLLLRLLDWVRLHVCDVDSMVREVLSSESPSKHKLFWNVVDIFVLQ
GRMDEARHLLSKEASANPTSMNMYKILDELMKKMPVPSIGNTQTLTELELKWQHWHEECQ
RYLQDGTFASSPHMESICKILLGDEDAILEKKELMTTWYHFLVTRLLYSHPTVKPVELRF
YAQSSMDLFLGGESSPEPLDMILMAAFEFEIHQVIKECSIVLSNWWFVAHLTDLLDHCKL
LQSHNLYFGSNMREFLLLEYASGLFSHHSLWQLGVDYFDHCPEYGRVYLELHIERIPLST
EQKALKVLRICEQRQMQEQVRSICKIMAMKALRNNRLGSALSWSIRAKDAAFATLISDRF
LKDYCERGCFSDLDLIDNLGPSMLLSDRLTFLGKYREFHRLYGEKRFSEAARLLLTLMTA
HIAPCSFWMTLLTDALPLLEQKEVIFSAEQTYELMRCLEDLTAGNPDKQKFQDDDVETTK
VEMLRLALARNLARVIVKEGTVEGS
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggggtggcactcgtccgcccgcacggcccgcccggagcatccccctcccgcatggcct
caggccggcggctcgggcggggcggagcggggtgtcccgccccgccggggcctcgggagc
gggcggcgcttccggggcgagcggcgctgcctgtcccgggggcccccgctctgcttcgcc
tggggccccgcggaggtgctggtgtgcgagaccctgttcgaccgcgcaggtaccgggcat
ggagcgcccagctcctcccaggtcttcgtggtccgcagggatcaggacatttacatccag
accctgcggaaactcttcaacgagtcgcacgggattttcatggggctgcagcggagcgag
gaggagctggcggggaagtcgcggaaggcgcatttggttcaagtgagtaaaaactaccgg
tcagtgataagagcctgcatggaggacatgcacgaggcagctgtttcgacccaggaccct
gccctgcaaggccagtacagcactcaggtttccattctttctgcaatggagctgatctgg
aacctgtgtgagattctgtttgttgaagcagctacagctgggcccctgctgctgcgcctc
ttggactgggtgcggctccacgtgtgtgacgtggacagcatggtcagggaagtcctgagc
agtgagagtccatccaaacacaagctcttctggaacgtggtggatatctttgtgctccaa
ggccggatggacgaagcgcggcacctgctctccaaggaagccagtgccaaccccacatcc
atgaacatgtacaaaatcttggatgagttgatgaagaagatgcctgtgcccagtattggc
aatacccagacactgacagagctggagctgaagtggcagcactggcacgaggaatgccag
aggtatctacaggatggaacttttgcttccagtccccacatggaatccatctgcaagatc
ctgctgggagatgaggatgccattttggagaagaaggagctgatgaccacgtggtatcac
ttcctggtcacccggctcctgtactcccacccaacggtgaagccagtggagctgcgcttc
tatgcacagtctagtatggacttgttcctgggtggagagagcagccctgagccactagac
atgattttaatggcagcctttgaatttgagatacatcaagtgatcaaggaatgcagcatt
gtcctgagcaactggtggtttgtggctcatctgactgacctgctggatcactgcaaactc
ctgcagtctcacaatctctattttggttcaaatatgcgtgaattcctcctgctggagtat
gcctcgggactcttctcccatcacagcctgtggcagctgggggtggattactttgaccac
tgcccggagtacggccgggtgtacctggagctgcacatcgagcgcatcccgctcagcacc
gagcagaaggccctgaaggtgctgaggatctgtgagcagaggcagatgcaggaacaagtg
cgcagcatctgcaagatcatggccatgaaggctctgcgcaacaaccgcctgggctcggcc
ctgtcctggagcatccgagccaaggacgccgcctttgccaccctcatctcggaccgattc
ctcaaggactattgtgaaagggggtgtttctctgacctggacctcattgacaatctgggc
ccgtccatgctgctcagtgaccggctcacgttccttgggaagtaccgggagttccaccgg
ctgtatggggagaagcgcttctcggaggcggcgcggctgctgctgacgctgatgacggcg
cacatcgccccctgctccttctggatgacgctgctcaccgacgcgctcccgctgctggag
cagaaggaggtcatattttcagcagagcagacatacgagttgatgcgatgcctggaagat
ctgacagcagggaatccagataagcagaaattccaggatgatgatgttgagacaaccaaa
gtggaaatgctgaggcttgctcttgcacggaatcttgcacgagtcattgtcaaagaaggc
accgtggaagggtcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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