KEGG   Ficedula albicollis (collared flycatcher): 101814893
Entry
101814893         CDS       T02815                                 
Symbol
TOP3B
Name
(RefSeq) topoisomerase (DNA) III beta
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03440  Homologous recombination
fab03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    101814893 (TOP3B)
   03460 Fanconi anemia pathway
    101814893 (TOP3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fab03032]
    101814893 (TOP3B)
   03400 DNA repair and recombination proteins [BR:fab03400]
    101814893 (TOP3B)
Enzymes [BR:fab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     101814893 (TOP3B)
DNA replication proteins [BR:fab03032]
 Eukaryotic type
  DNA Topoisomerases
   101814893 (TOP3B)
DNA repair and recombination proteins [BR:fab03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     101814893 (TOP3B)
   FA (Fanconi anemia) pathway
     101814893 (TOP3B)
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-GeneID: 101814893
NCBI-ProteinID: XP_005054966
UniProt: U3JZQ9
Position
15:complement(8650125..8661277)
AA seq 862 aa
MRTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFIGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNPEKESSLTLDWDRVRVFDREVAQMFLNITKMAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKTLLSEGINRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCVGKVVTSPGFTEVMPWHSIPLEESLPHCEKGDLFPIGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDPTSGPKWKMACNKCNVVVHFFENAHKVRVSAETCELCEAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRR
PGGRLNPKKPKDKMAALAAYFV
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgaggaccgtgctcatggtggcggagaagccgtccctggcgcagtccatcgccaagatc
ctctccagagggaacatgtcctctcgcaagggactcaacggtgcgtgctctgtgcacgag
tacaccgggtccttcatagggcagagtgcccacttcaagatgacatcggtgtgtggtcac
gtcatgactttggatttcataggaaaatataacagctgggataaagtggatccagcagaa
ctttttagcaaagctcccacagaaaagaaagaagctaatcccaaactgaccatggtgaag
tttttacaggtggagggaagaggctgtgattgtattgtcttgtggttggattgtgataag
gaaggagaaaacatctgttttgaagttcttgatgctgttcttcctgtcatgaacaaacct
cgtggcacggagaggacaatttacagagctaaattcagttccatcaccgacacagacatc
tgcaatgccatgaatcacttgggagagcccaatcgcaatgaagctctgtccgtggatgcc
cgccaggagctggatctgaggattggctgtgccttcacgaggttccagactaaatatttt
caggggaaatatgggaatttagacagctccctcatctcctttgggccatgtcagacccca
acacttggattctgtgttgagaggcatgacaaaattcagtcatttaagcctgagacttac
tgggtgttgcaagctaaagtgaaccctgaaaaagaaagttctctcactttggattgggat
agagtgagggtgtttgatcgtgaggttgctcaaatgttcttgaatataacaaagatggca
aaagaagcaaaggtagaatctgtgagtaaaaaagagaaggtgaaacagaggccactggct
ctgaacacagtagaaatgctccgagtagccagtgctgctttaggaatgggtccccaacat
gccatgcaaatagcagagcgtctttacactcaaggctatatcagctaccctcgaacagaa
actacccattatccagaaaactttgacctgaaaggatgtttgagacaacaagccaataat
ccttactgggcagaaactgtaaaaacattgctatcagaaggtatcaatcgtccaaggaaa
ggccatgatgcaggagaccatcctcccatcaccccaatgagagctgcaacagaagcagag
ttaggtggagatgggtggcgactgtatgagtacataactcggcacttcattgccactgtc
agtgctgactgcaagtacctacaaaccaccatttccttcagtattggccctgaaagattt
acctgtgttggaaaggtggtaacttcaccagggtttacagaagttatgccgtggcacagc
atcccattagaagagagccttccccactgtgagaaaggagatctttttccaattggtgaa
ataaagttgctggaaaagcaaaccagccctcctgattacctgacagaagcagaactgatc
actctgatggaaaagcatggcattggaactgatgccagtattccagtccatattaacaac
atttgccagcgaaactatgtcacagtggagagtggtcgaagacttaagcctacaaacctt
ggcattgttctggttcatggttattataaaatagatgcagaattggttcttcctacaatc
cgcagtgctgtagagaagcaactcaacttaatagctctgggtaaagcaaattaccatcag
gtcctggagcacacccttgacatcttcaaaaggaagtttcactattttgtggattctatt
gcaggtatggatgaattgatggaagtgtctttttcacccttggctgccacaggcaaaccc
ctttcccgctgtggtaaatgccatcgtttcatgaagtatattcaggccaagccgagtcgc
ctgcactgctctcactgtgatgacacctacagtctcccccagaacggtaccatcaaactc
tacaaggagttgcgttgtcccctggatgactttgagctggtgctgtggtcgtctggatcc
agaggaaagagttatccactgtgcccatactgttacaaccatcctcccttcagggacatg
aaaaaaggcatgggctgtaatgagtgcacccaccccacgtgccagcattcccttagcatg
cttggaattgggcagtgcgtggagtgtgagaacggggttctggtgctggaccccacgtcg
ggtcccaagtggaagatggcctgcaacaaatgcaacgtggtggtgcacttcttcgagaac
gcccacaaggtgcgggtgtcggccgagacctgcgagctgtgcgaggcggcgctggtggat
gtggattttaacaaagccaagtctcccttacctggcgatgagacccagcattcgggctgt
gtgttctgtgaccccgtgtttcaggatctggtggagctgaaacacgcggccatgaggcac
cccatgcaccgtgggggacaagggaagaggcagggccggggaaggggcaaaggccggaga
cctggaggaagactcaacccaaagaaacccaaggacaaaatggcagctctggctgcttac
tttgtataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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