KEGG   Ficedula albicollis (collared flycatcher): 101817792
Entry
101817792         CDS       T02815                                 
Symbol
POLR1B
Name
(RefSeq) RNA polymerase I subunit B
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101817792 (POLR1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fab03021]
    101817792 (POLR1B)
Enzymes [BR:fab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     101817792 (POLR1B)
Transcription machinery [BR:fab03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     101817792 (POLR1B)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpa2_4 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 101817792
NCBI-ProteinID: XP_016152618
Position
3:complement(7529298..7545387)
AA seq 1010 aa
MPQGTIKHTLGHIPVMVKSKLCNLYGFSPQDLLQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFHKEL
FFLPLGFALKALVNFPDYQIFEELVKGREDDTFFGNCVTEMLRAVVDAGCLTQQNVLDYL
GKSFRVKLNLPEWYSNEQAADFILSNCICIHLTKRTEKFYLLCMMTQKLYAFAKGECMED
NPDSLMNHEVLTPGQLFLMFLKERLETWLQSVKFVLQKRAEKADISLNIDSLAKIFSLAP
DFSKPFEYLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVMDIPPLLCSLGVTPIDA
APSQPYSECYRVVLDGSMVGWVERELAPEIAQTLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTSPCRMVRPVKNLSYGRNEWIGTLEQIFMNVATMESEVVPGVTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYRDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPVGTNAIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKVESIDLSLK
ASRAGDNLVFGIKPGDPNVGEKLDADGLPFVGSILQPGDPFYSFMNFDTGETFTVYYPSK
EVGVVDNVRLCSNDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGE
TLASAGYNFFGTEKMYSGISGVELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PVKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTSPVLEKL
SHSSVTSSRRYSCSVCSKVDAIEVVPVPHVFHYFVAELAAMNIKTKLNVE
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgccacaaggaactatcaaacacaccttagggcacattccagtcatggtgaagtccaaa
ctgtgcaacctctatggtttttctccacaagaccttctgcagcaccatgaggaggaagag
gaaatgggaggctactttataatcaatggcttagaaaaagtaatcaggatgttgattatg
cctaggcgaaacttccctcttgcaatgacaagacacaagtggaaaaacagaggccctggt
ttcacagagtatggggttgtgatgcattgtgtcaaggatgagcatactgcaataaacatg
aaccttcactacttggaaaacggctgtgtcatggtgaatttcatttttcacaaagagttg
ttcttcctccccttgggatttgctctgaaggcattagttaatttcccagactaccagatt
tttgaagagctggtgaaaggaagggaagatgacaccttttttgggaactgtgttactgag
atgctgagagcggtggtggatgctggctgtttgacacagcaaaacgtcctggattacctg
ggaaagagcttcagagtgaaactcaacctgcctgagtggtacagcaatgaacaggctgca
gatttcattctgagcaattgtatttgcattcacctgaccaagagaactgaaaagttctac
ctgctctgtatgatgacccagaagctctatgcttttgctaaaggggaatgcatggaggat
aatccagacagtctcatgaatcatgaagtgcttaccccaggacagcttttccttatgttc
ttaaaggagaggcttgaaacctggctgcaatctgttaagtttgttctgcagaaaagagca
gaaaaggcagatatcagcctgaatatagatagcctggcaaagatattcagcctggcacca
gacttcagcaagccatttgagtatctgcttgcaactggtaatctgcggtctaaaacaggg
ctgggcatgttgcaggccagtggtctctgtgtggtgggggacaagctgaatttcatccgc
tacctgtcccacttccgctgcatacacagaggggcggcgttttcccagatgagaaccacg
actgtccgcaagctgctgcccgaatcctggggcttcctgtgccctgtggacacccctgat
ggagagccctgtgggctgatgaaccacatgacagctctgtgtgaaatcgtcaccgagatg
gtgcccgtgatggacattccacctttgttatgttccctgggtgtcacccccattgatgca
gctccaagccagccttactcagagtgctacagagttgtgctggatggctccatggtgggc
tgggtagagcgggagttggctcccgagattgcacaaaccctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaaccc
agcctgtatcctgggctgttcattttcactagcccttgccggatggtgcggcctgtcaag
aacctgtcctatggaaggaatgaatggattgggactctggaacagatcttcatgaatgtg
gccacgatggagtcagaggtggtgcctggagtgaccactcaccaggaactcttccctcac
agcattttgagcgtggtggccaatctcattcccttctctgaccacaaccaaagtccacgg
aacatgtaccagtgccagatgggaaagcagaccatggggtttcctgtttacaactacagg
gatcgctcggataacaagctgtaccacctgcacaccccccagagccctctggtgaggccc
agcatgtatgattattacgggatggacagctatcctgttggcaccaacgctattgtggct
gtcatctcctacagtggctatgacatggaagatgcaatgatcgtaaataaatcttcctgg
cagagaggatttgcttatggaagtgttatcaaggtggaaagcattgacctttcccttaaa
gccagcagggcaggcgataatttagtatttggcatcaagcccggtgatcccaacgttggg
gagaagctggatgctgatggactgccttttgttgggtctatcctgcaacctggggacccc
ttctacagcttcatgaacttcgacacaggggagaccttcactgtgtactatccgagtaag
gaagtgggcgttgtggacaacgttaggttgtgcagcaacgaccgtggcactgggaagttc
aagaaggcttgcatcactgtgagggttccccgaaatcccactattggagacaaatttgcc
agccgtcatggacagaaaggtatcctgagccagctctggcccgtcgaggacatgccattc
acggagaacgggatggttccagacatcctcttcaaccctcatggctttccttcccgcatg
accattgggatgttgattgagagcatggcggggaagtcagcagccctgcatggggtctcc
tatgatgccactcccttcaccttcaccgagaagaagtctgctctgaaatactttggtgag
actttagcgagcgcgggttacaacttctttgggacggagaagatgtacagcggcatcagt
ggggtggagctagaggcagagatcttcgtgggggtggtgtactaccagcgcctgcgccac
atggtctccgacaagttccaggtgaggaccacggggccccgagacgccgtcaccaaccag
cctgtcaaggggaggaatgtggaaggcgggatccgcttcggcgagatggagcgggacgct
ctgctggcccacggcacgtccttcctgctgcaggaccgcctcttcaactgctctgacggc
tccgtggcctatgtgtgcacgagctgcggcagcatgacatcccctgtgctggagaaactg
tcccactcctctgtcaccagcagcaggaggtattcctgctccgtctgcagcaaggtggat
gccatcgaggttgtccctgtgccccatgtcttccactattttgtggctgagctggcagcc
atgaacataaaaacaaagctcaatgtggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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