KEGG   Ficedula albicollis (collared flycatcher): 101819998
Entry
101819998         CDS       T02815                                 
Symbol
POLR2F
Name
(RefSeq) RNA polymerase II subunit F
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03020  RNA polymerase
fab03420  Nucleotide excision repair
fab04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101819998 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101819998 (POLR2F)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    101819998 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fab03021]
    101819998 (POLR2F)
   03400 DNA repair and recombination proteins [BR:fab03400]
    101819998 (POLR2F)
Transcription machinery [BR:fab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101819998 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     101819998 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     101819998 (POLR2F)
DNA repair and recombination proteins [BR:fab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101819998 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 101819998
NCBI-ProteinID: XP_005039807
UniProt: U3KE37
Position
1A:complement(51820299..51824148)
AA seq 127 aa
MSDNEDNFDGDDFDDVEEDEGLEDLENAEEEGQENVEILPSGERQQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcggacaacgaggacaactttgacggggatgacttcgacgatgtggaggaggatgag
ggcctggaggacctggagaacgcggaggaggagggacaggagaacgtggagattctgccc
tcgggagagcggcagcaggcaaaccagaagcggatcaccaccccctacatgaccaagtac
gagcgagccagagtcctgggcactcgtgctctccagatagcgatgtgtgcccctgtgatg
gtggagctggaaggagagacagaccccttgctcattgccatgaaagagctcaaagcacgc
aagatccccataatcatccgtcgttaccttccagatggcagctatgaagactggggtgtg
gatgagttaattatcacagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (48)   

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