KEGG   Ficedula albicollis (collared flycatcher): 101820433
Entry
101820433         CDS       T02815                                 
Symbol
DDX54
Name
(RefSeq) DEAD-box helicase 54
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fab03009]
    101820433 (DDX54)
Enzymes [BR:fab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101820433 (DDX54)
Ribosome biogenesis [BR:fab03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    101820433 (DDX54)
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT ResIII
Other DBs
NCBI-GeneID: 101820433
NCBI-ProteinID: XP_005055289
Position
15:10577191..10582620
AA seq 820 aa
GGRDGTGQNRVPVTPLPAFPTTTEEDDDGADAELDTQAMVRAQNQKKKKSGGFQSMGLSY
PVFKGIMKKGYKVPTPIQRKTIPAILRGRDVVAMARTGSGKTACFLIPMFERLKAPSQAG
ARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGR
LVHVAVEMKLKLHTVEYVVFDEADRLFEMGFAEQLQEIIARLPDCHQTVLFSATLPKLLV
EFARAGLTEPMLIRLDVESKLSEQLKLVFFHVRGDDKPAVLLHLLRSVVKPQDQTVVFVA
TKHHTEYLRELLTAQGIRCTHIYSSLDQTARKINIAKFSQGKCPVLLVTDVAARGLDIPM
LDNVINFSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLFLGRPLVLAGA
QEMPADAGGVLGRVPQSLVDDEECLLLTDHEGSLELRSLRRVADNAHKQYLRSRPGPSPE
SIKRAKELDVSQLGMHPLFRARFEDTELQRLKLVDSIKTYKSKATIFEINATSRTPASTV
MRSKRRHDCALIEKFQRGQQEKKAAALKGQGLCPAAPEPQDGEGEQEDLQDVFSNVGAQK
RKRGQGGEDGPRKKPQQAAQQDEDFYIPYRPKDFESERGLSVGGEGSAFEQQAAGAVLDL
MGDENHNLNKSKQLLKWDRKKKRFVGQTGQEDKKKVRTESGRYISGSYKNNLYEKWKQKY
KVDERDEDEEGPRSREQFRGKHRRGHGPTQPPAQGRVRSELKNKQQILKQRKRAAKQRFL
QSGGLKRLKARNRQRVQELRQMAFGRRAGAARKGKLRKRM
NT seq 2463 nt   +upstreamnt  +downstreamnt
gggggacgggacgggacgggacagaacagagtccccgtgaccccactgcccgccttccct
accaccactgaggaggatgatgatggcgccgatgctgagctggacactcaggccatggtg
cgggcccagaaccagaagaagaagaaatctggaggattccagtccatgggcctcagctac
cctgttttcaagggcatcatgaagaagggctacaaggtgcccacgcccatccagaggaag
accatccctgccatcctgcgaggccgggacgtggtggccatggctcgcacgggcagtggg
aagacggcgtgtttcctcatccccatgttcgagcggctgaaggcgcccagccaggccggg
gcacgcgccctcatcctctcgcccacccgggagctggccctgcagaccctcaagttcacc
aaggagctgggcaagttcaccggcttgaagacagccctgatactgggaggagacaagatg
gaggaccagtttgctgctctgcatgagaaccccgacataatcatagccacgcctgggcgc
ctggtgcacgtggcagtggagatgaagctgaagctgcacaccgtggagtacgtggtgttc
gacgaggccgacaggctctttgagatgggctttgctgagcagctgcaggagatcatcgcc
cggctcccagactgccaccagaccgtgctgttctccgccacgctgcccaagctgctcgtt
gagtttgcccgggctggcctcacggagcccatgctgatccgcctggatgtggagtccaag
ctgagtgagcagctcaagctggtgttcttccacgtgcgcggggacgacaaaccggccgtg
ctgctgcacctgctccgcagcgtggtgaagccccaggaccagacagtcgtctttgtggcc
accaagcaccacacggagtatctgagggagctgctgacagcacagggcatccgctgcacc
cacatctacagctctctggaccagactgcccgcaagatcaacattgccaagttctcccag
ggcaagtgcccagtgctgctggtcaccgacgtggccgcccgggggctggacatccccatg
ctggacaacgtcatcaacttcagcttccctgccaagggcaagctgttcctgcatcgtgtc
ggccgtgtggcccgagctggccggagtggcactgcctactcgctggtggctcccgatgag
atgccctacgtgttcgacctccacctcttcctggggcgcccgctcgtcctcgccggagcc
caggagatgcctgctgatgctggcggggtcctgggccgtgtcccccagagcctggtggat
gatgaggagtgcctgctgctgacggaccacgagggctctctggagctgcgcagcctccgc
cgcgtcgccgacaacgcccacaagcagtacctgcgctcccggcccggcccctcgccagag
tccatcaagagggccaaggagctggatgtgtcccagctgggcatgcaccccctcttcaga
gctcgcttcgaagacaccgagctacagaggctgaagttggtggatagcattaaaacctac
aaatccaaggcgaccatctttgagatcaacgccacatcccgcacaccggccagcaccgtg
atgcgatccaagcggcgccacgactgcgccctgatcgagaagttccagcgtgggcagcag
gagaagaaggcagcagcacttaaagggcaggggctgtgcccagctgctcctgaaccccag
gatggggaaggagagcaggaagacctccaggatgtgttctccaatgtgggggcccagaag
cgaaaacggggccaaggaggagaagatggtcccaggaaaaagccgcagcaggcggcacag
caggacgaggacttctacatcccataccggcccaaggactttgagagtgagcgggggctg
agtgtgggtggcgagggcagcgccttcgagcagcaggcggccggggccgtgctggatctc
atgggcgacgagaaccacaacctcaacaagagcaagcagctgctcaagtgggaccgcaag
aagaagcggtttgtggggcagacgggccaggaagacaagaagaaggtgcggacggagagt
gggcgctacatcagcggctcctacaagaacaacctctatgagaagtggaagcagaagtac
aaggttgacgagcgggatgaggatgaggaagggccacgcagcagggagcagttcagaggg
aagcacaggcgtgggcacggccccacgcagcccccggcgcagggcagggtgcgctcggag
ctgaagaacaagcagcagatcctgaagcagcgcaagagggcagccaagcagcgcttcctg
cagagcgggggcctgaagcgcctcaaggcccgcaaccggcagcgcgtgcaggagctgcgg
cagatggcctttgggcgccgggcaggcgcggccaggaagggcaagctgaggaagaggatg
tag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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