KEGG   Ficedula albicollis (collared flycatcher): 101820888
Entry
101820888         CDS       T02815                                 
Symbol
DDX52
Name
(RefSeq) DExD-box helicase 52
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fab03009]
    101820888 (DDX52)
Enzymes [BR:fab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101820888 (DDX52)
Ribosome biogenesis [BR:fab03009]
 Eukaryotic type
  90S particles
   Helicases
    101820888 (DDX52)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA AAA_19 HEM4
Other DBs
NCBI-GeneID: 101820888
NCBI-ProteinID: XP_005056655
Position
19:complement(10559377..10565438)
AA seq 649 aa
METQELFRRLGSGARFDVRRFGPDARRFGVRGHRGEGSGVGSASAALRAGPAHGHHPFPC
SPQVVKGNRGSVSLESLDFFGNKEGAPQGSAEESWGLAGAEEEVKQQEDGAGKNDGKRKR
TTESSEGKRRKKKRRGAVSMPELSENTEIKWMSSLEAKFEDAKDKKPTAEKLERLRREKI
NRFRNRHRINIQGTDLPDPIATFDQLQEEYKVHPKIMENIQAAGFHVPTPIQMQAIPVML
HGREVLASAPTGSGKTLAFCIPLLTHLKQPRNKGFRALIISPTRELASQTHRELVKLAEG
TGFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKEDPPAIDLSSVEWLVVDES
DKLFEDGKSGFRDQLGSIFLACTSHLVRRALFSATFAHDVEEWCKLNLDNVVLVSVGARN
SAAETVEQELLFVGSETGKLTAMRELVKKGFAPPVLVFVQSIERAKELFHELIYEGINVD
VIHADKTQQQRDKVVQSFRAGKIWVLICSALLARGMDFKGVNMVINYDLPTSAVEYIHRI
GRTGRAGHRGKAVTFFTEDDKPLLRSIANVIQRAGCPVPEYIKHLPKLQSKQKKKFIKKP
LTRESICTTPKCFLKKGRRKMKTTKENTKGKKKDKEDKKGSKLQTVSES
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggagacccaggagctgttccggcgcttgggcagcggcgctcgctttgacgtgcggcgc
ttcgggccggacgcgcggcgcttcggggtgcgggggcaccgcggggagggctcgggggtc
gggtcagcctccgcagcgctgagagcgggacctgcccatggccatcacccttttccctgt
tccccgcaggtggttaaagggaaccgcggcagcgtctcgctggagagcctcgacttcttc
gggaataaggagggagcccctcagggatctgccgaggaaagctgggggctcgcaggggct
gaagaggaggtgaagcagcaggaagatggagcagggaaaaacgatggaaagaggaaaaga
acgacagaaagcagtgaagggaaaagaagaaagaaaaagagacgaggagcagtgtcaatg
ccagagctgtcagaaaacactgaaataaagtggatgtcctctctggaagcaaagtttgaa
gatgcaaaagacaaaaaacctactgcagagaagcttgaacgcttgaggagagaaaagata
aatcgcttcaggaaccggcacaggatcaacattcaggggacagatctccctgaccccatt
gccacctttgatcagcttcaggaggagtacaaagtgcaccctaaaatcatggagaatatc
caggctgcaggcttccatgtcccaacacccatccagatgcaggcaattcctgtcatgctg
catggtcgggaggttctggcttcagctcctacagggtctggaaaaacactggcattttgt
atccctctcttaacacatctgaagcaacccaggaacaaaggattcagggctctgatcata
tcaccaacccgagaacttgccagccagacccaccgagagctggtgaagctggcagagggc
acaggcttcagaatccacatgatccacaaggcagctgaggcagccaagaagtttgggccc
aagtcttccaagaaatttgatatactggttaccactcccaacagactcatttatttgctg
aaagaagatcctccagcaatagacttgagcagtgtggagtggctggtggtggacgagtca
gacaagctgtttgaggatggcaagtcaggattcagggaccagctgggttccatcttcctg
gcatgcacctcccacctggtcaggagggccctgttcagtgctacctttgcccatgacgtg
gaggagtggtgtaagctcaacctggacaacgttgtgctggtgtctgttggagcaagaaac
tctgcagcagagacagtagaacaagagctgctgtttgttggatctgagacaggaaaacta
acagcaatgagagagcttgttaaaaagggttttgctcctccagtcctggtttttgtacag
tctattgagagggctaaagagcttttccatgagcttatttatgaaggcatcaatgtggat
gtcatccatgcagacaagactcagcaacagagagacaaagtagtgcagagtttcagagct
gggaagatctgggtgctcatctgctcagcattactggctcgagggatggatttcaaaggt
gtgaacatggtcatcaattatgatttgccaacgagtgcagtggaatacatccacaggata
ggtcgtactggaagagcaggacacagaggaaaggcagtcactttctttacagaggacgat
aaacctttattacggagtattgccaacgttatccagcgagctgggtgtcctgtgccagag
tacataaaacatttgcccaaactgcagagcaaacaaaagaaaaaattcattaagaaacct
ttgacaagagaatccatttgtaccactccaaagtgcttcttgaaaaaaggcagaagaaaa
atgaaaactacaaaggaaaatactaagggaaagaagaaagataaagaagacaaaaagggc
agtaaattacagactgtttcagaaagctga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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