KEGG   Frankia alni: FRAAL4657Help
Entry
FRAAL4657         CDS       T00384                                 

Gene name
dapE-like
Definition
(GenBank) succinyl-diaminopimelate desuccinylase like
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
fal  Frankia alni
Pathway
fal00300  Lysine biosynthesis
fal01100  Metabolic pathways
fal01120  Microbial metabolism in diverse environments
fal01230  Biosynthesis of amino acids
Module
fal_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:fal00001]
 Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    FRAAL4657 (dapE-like)
Enzymes [BR:fal01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     FRAAL4657 (dapE-like)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28 Peptidase_M42
Motif
Other DBs
NCBI-ProteinID: CAJ63299
RhizoBase: FRAAL4657
UniProt: Q0RGT7
Position
complement(5049068..5050252)
Genome map
AA seq 394 aa AA seqDB search
MYSQSGRYPTAGVEVLERTDLLRLAAALVEVPSVSGDEHLLAGLVEHRLRARAPGLRMIR
DGNNIIATTRGAQAGKPARDRHVVLAGHLDTVPAAKNYPTAIPGTVSGLGAVDMKGGLAV
MLVLAERAQDSDHHLTFVFYDNEEVGSRRSGMTLLFDRYQDFLQADLAILLEPTGGLLEA
GCQGNLVVELRYDGSRAHTARPWRGVNAIHRATPALARFGSFEPGPAVVDGLTYRQSLSV
VGVSSGVQGNVVPDACQVRVNFRHAPNLSSEEALGTVVGLAGDADGTQVVLSSPPAPPNL
EHPLLAALRASAGVDVRPKLGWTDVGRFAAHGVPAVNFGPGDSELAHTGRETVSGAELAA
CHAALARFLFADAAGIPPDRLRNIGPHPASEVRP
NT seq 1185 nt NT seq  +upstreamnt  +downstreamnt
atgtactcgcagtcagggcggtacccgaccgccggcgtcgaggtgctcgagcgcacggac
ctgctgcggttggccgcggcgctggtggaggtgccgtcggtcagcggcgacgagcacctg
ctggccgggctggtggagcaccgcctgcgggcccgcgcacccggtctgcggatgatccgg
gacggcaacaacatcatcgcgacgacgcggggtgcacaggcggggaaacccgcgcgggat
cggcacgtggtgctggccggccatctcgacacggtgccagcagcgaaaaattaccccacg
gcaataccgggaacggtatccgggcttggcgcggtggacatgaagggcggtctcgccgtg
atgctggtcctggccgaacgggcgcaggactccgaccatcacctcacgttcgttttctac
gacaacgaggaggttggctcccgtcgcagcgggatgaccctgctgttcgaccggtaccag
gatttcctccaggccgacctggcgattctgctcgagccgaccggcggcctcctcgaggcg
ggctgccagggcaatctggttgtcgagctgcgctatgacggctcacgcgcccacaccgcg
cgaccatggcggggcgtcaacgccattcatcgtgcgactcccgccctggcccggttcggg
agttttgaaccgggccccgcggtcgtcgacggactcacctaccggcagtccctttccgtc
gtgggggtgagcagcggcgtgcagggcaatgtcgtgccggatgcctgtcaggtacgggtg
aacttccggcacgcgccgaacctgagcagcgaggaggcgctgggcacagtggtcggcctc
gccggggacgccgacggcacccaggtggtcctgtcctcgccgcccgcgccacccaatctg
gagcatcccctgctcgcggcgctgcgagcgagcgccggggtggacgtgcgaccgaaactc
ggctggactgacgtcggacggttcgcggcccacggcgttcccgccgtcaacttcggtccg
ggggattccgagctcgcccacaccggccgcgagaccgtcagcggtgctgagctggcggcc
tgccacgcggcgctcgcccgcttcctgttcgcggacgccgcggggattccgcccgacagg
ctccggaacatcggtccgcacccagcgtcggaggttcgaccttga

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