KEGG   Fictibacillus arsenicus: ABE41_009955
Entry
ABE41_009955      CDS       T04452                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
far  Fictibacillus arsenicus
Pathway
far03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:far00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABE41_009955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:far03019]
    ABE41_009955
   03016 Transfer RNA biogenesis [BR:far03016]
    ABE41_009955
Enzymes [BR:far01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     ABE41_009955
Messenger RNA biogenesis [BR:far03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ABE41_009955
Transfer RNA biogenesis [BR:far03016]
 Prokaryotic type
  tRNA degradation factors
   ABE41_009955
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 DUF3819 S1_2 SPATA25 Glyco_hydro_99
Other DBs
NCBI-ProteinID: ANX12334
UniProt: A0A1B1Z4K6
Position
1905030..1907144
AA seq 704 aa
MDQQKRTFTMDWAGRTLTFEIGELAKQANGAVMVRYGDTAVLSTAVASKQPKNLSFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVVSTVMSV
DQNCSSEMAAMIGSSLALSISDIPFEGPIAGVTVGRIDGEFVINPTVEQNEKSDIQLIVA
GTKHAINMVEAGAEEVSEETMLEAIMFGHEEIKKLIAFQEEIVSEIGKEKMEVVLHELDK
DLEQEVREIVGSDVKEAVKVIEKHARQEALDAVGANLASRYEEDEEKANEAKEILHKLIK
EEVRRLILKEKIRPDGRKTDEIRKLSSTVGILARTHGSGLFTRGQTQALSICTLGALGDV
QVLDGLGVEESKRFMHQYNFPPFSVGETGFMRGPGRREIGHGALGERALEQVIPNEEEFP
YTIRLVSEVLESNGSTSQASICASTLALMDAGVPIKAPVAGIAMGLISDGEDVTVLTDIQ
GMEDHLGDMDFKVAGTPNGITALQMDIKISGINREILQEALTQAKEGRMIILKSMLSTLS
ESRTELSQYAPKILTMKINPDKIRDVIGPSGKIINKIIEETGVKIDIEQDGTIFIASTDE
PMNNKAKKIIEDIVREVQVGEYYMGKVKRIEKFGAFLELFSGKDGLVHISELAEERVGKV
EDVVKLGDEILVKVMEIDNQGRVNLSRKVVLKEEKAKNEQQQNV
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggatcaacaaaaacgaacttttaccatggactgggcgggcagaacgcttacgttcgaa
attggagaattagcaaaacaagcaaacggtgctgttatggtcagatatggtgatacggca
gtactctctactgctgtagcttcaaaacagcccaaaaatttaagttttttcccactgaca
gtaaactacgaagaacgtttatacgcagttggtaaaatccctggaggatttattaaacgt
gagggccgtccaagtgaaaaagctgtattggcaagccgcttgattgaccgtccgatccgt
cctttatttgctgatggtttccgtaacgaagtacaagttgtcagcactgtaatgagtgtt
gatcaaaactgttcttctgaaatggcagcaatgatcggatcatcccttgcattgtctatt
tcggatattccttttgaaggaccaatcgcaggtgttactgtcgggcgtattgacggcgag
tttgttatcaacccgactgttgaacaaaacgagaaaagtgatattcaattaatcgttgca
ggaacaaaacatgcgattaacatggttgaagctggcgcagaagaagtttctgaggaaacg
atgcttgaagcaatcatgttcggtcatgaagagattaagaagctaattgcattccaagaa
gaaatcgtttcggaaatcggaaaagaaaagatggaagtagttcttcatgagcttgataag
gatcttgagcaagaagttcgtgaaattgtcggaagcgatgtaaaagaagctgtaaaagta
attgagaaacatgcacgtcaagaagcccttgatgcagttggtgcaaatctcgcttcacgt
tatgaagaagatgaagaaaaagctaatgaagctaaagagattctacataaacttatcaaa
gaagaagttagacgcttaatcttaaaagaaaaaattcgtccagatggaagaaaaacggat
gagatccgcaaactctcttctactgtagggattttagctagaacacatggttctggtctg
tttacacgagggcagacacaagcattaagtatctgtactttaggtgcgttaggtgatgtt
caggttcttgacggacttggtgttgaagagtctaagcggtttatgcatcaatataatttc
cctccattcagtgtaggtgaaacgggctttatgcgcggaccaggcagacgcgaaatcggt
catggtgcattgggagagcgcgctttagaacaagtaattccgaatgaagaggaattcccg
tacacaattcgcttagtttctgaagtgcttgaatcaaacggatctacatctcaagcaagt
atttgtgcaagtacattggcactaatggatgctggtgtgccgatcaaggcgccagttgca
ggaattgcgatgggtctgatctcagatggtgaagatgttacagttcttacagatattcaa
ggtatggaagaccaccttggagatatggactttaaagtagcaggtacaccaaatggcatc
actgctctgcaaatggatattaaaatttcaggtatcaaccgtgaaatccttcaagaggca
ctaacacaagcaaaagaaggccgtatgattatcttgaagtctatgctttctacactttct
gagtctcgtacggaattatctcagtatgctcctaagattttaacaatgaagattaaccct
gacaaaatccgtgatgttattgggccaagcgggaaaatcatcaataaaatcattgaagaa
actggagttaaaatcgacatcgaacaagacggaacgatctttatcgcttcaactgatgag
ccgatgaacaataaggcgaagaagattattgaagatatcgtaagagaagttcaagttggc
gaatattacatgggcaaagtaaagcgtattgaaaaattcggtgctttcttagaactattc
agcggcaaagatggattagtccatatttcagaactagctgaagagcgtgtaggtaaagta
gaagatgtcgttaagcttggtgatgaaatccttgtgaaagttatggagatcgataaccag
ggacgtgtaaacttatcacgcaaagtagtcctaaaagaagaaaaagcgaaaaatgaacag
cagcagaatgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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