KEGG   Frateuria aurantia: Fraau_1175
Entry
Fraau_1175        CDS       T01773                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
fau  Frateuria aurantia
Pathway
fau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Fraau_1175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fau03019]
    Fraau_1175
   03009 Ribosome biogenesis [BR:fau03009]
    Fraau_1175
Messenger RNA biogenesis [BR:fau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Fraau_1175
Ribosome biogenesis [BR:fau03009]
 Prokaryotic type
  rRNA helicases
   Fraau_1175
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_19 UvrA_inter P-loop_SecA adh_short
Other DBs
NCBI-ProteinID: AFC85634
UniProt: H8L4G0
Position
complement(1271803..1273614)
AA seq 603 aa
MSSPVSESSPAPAGFSALPLRPEILQALREVGYESPSPIQSATIPPLLEGRDVLGQAQTG
TGKTAAFALPVLSRIERDSNKPQALVLAPTRELAIQVAEAFQRYAAHMPGFHILPIYGGQ
SYGPQLQALRRGVQVIVGTPGRVIDHLTRGSLDLSELKFLVLDEADEMLRMGFIDDVEKV
LEATPPTRQVALFSATMPSQIRKIAQQHLKTPVEVTIKAATSTNTNIRQRYWWVSGLHKL
DAMTRILEAESFDAMIVFARTKQATEELSERLQARGFAAAAINGDIAQPQRERVIQQLKD
GKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVTPRE
KGMLRAIERATRQPIEEMKLPTIEAVNDRRVNRFKDRITETLGLDGLELFQQLIEQYEQE
HNVPAIEIAAALAKLSQGDQPLLLTPPPKREPRPFENDERRQRSERGDRPERGDRDSRAP
RPMREHRTEEGKRTYRIEVGHQHGVKPGNIVGAIANESGLESQFIGKLSIRGEYTLVDLP
DGMPREVFDHLGNVWVAQRQLKIHEWDGTESPDAGGSAPPRRGGGGYGKGRPGGRGPRPK
FSR
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgtcgtcccctgtttccgaatcctcgccggcccctgccggtttttccgctttgcctttg
cgccccgaaattcttcaggcgctgcgcgaggtcggatatgaatccccttcccccatccag
tccgccaccattccgccgctgctcgaaggccgcgatgtgctgggccaggcccagaccggc
accggcaagaccgcggccttcgccctgccggtgctctcgcgcatcgagcgcgacagcaac
aagccgcaggcactggtgctggccccgacccgcgaactggccatccaggtcgccgaggcc
ttccagcgctatgccgcgcacatgccgggtttccacattctgccgatctacggtggccag
agctacggtccgcagctgcaggccctgcgtcgtggcgtacaggtcatcgtcggcaccccg
ggccgtgtcattgaccatctgacccggggctcgctggacctgtccgagctgaagttcctg
gtgctggacgaagccgacgaaatgctgcggatgggctttatcgacgacgtcgaaaaagtt
ctggaggccaccccgccaacccgccaggtcgcgctgttctcggccaccatgccttcgcag
atccgcaagatcgcccagcagcacctgaaaacgccggtcgaagtgaccatcaaggccgcg
accagcaccaataccaatatccgccagcgctactggtgggtcagcggcctgcacaagctg
gacgcgatgacccgcatcctggaggccgagtccttcgatgcgatgatcgtcttcgcccgc
accaagcaggccaccgaagagctgtccgaacgcctgcaggcacgcggttttgccgccgcc
gccatcaacggcgatatcgcccagccgcaacgcgagcgcgtgatccagcagctgaaggac
ggcaaactggacattctggtggccaccgatgtggctgcccgcggtctggacgtcgagcga
atcagccacgtactgaactacgacatcccgtatgacacggaaagctatgtgcaccgcatc
ggccgtaccggtcgcgccggccgcagcggcgaggcgatcctgttcgtcacgccccgcgaa
aagggcatgctgcgggcgatcgagcgtgctacccgccagcccatcgaggaaatgaagctg
ccgacgatcgaggccgtcaacgaccgtcgcgtcaaccgtttcaaggaccgcattaccgag
accctgggcctggacggactggagctgttccagcagctgatcgagcagtacgagcaggag
cacaatgttccggccatcgagatcgctgccgcgctggccaagctgtcgcaaggcgaccag
ccgctgctgctgactccgccgcccaagcgcgagccacgcccgttcgaaaatgacgagcgc
cgccagcgcagcgaacgcggcgatcgtccggagcgtggcgaccgtgacagccgcgccccg
cgcccgatgcgtgaacaccgtaccgaggaaggcaagcgcacctaccgcatcgaagtcggt
caccagcacggtgtgaagcccggcaacatcgtcggcgccatcgccaacgaaagcggtctg
gagagccagttcatcggcaagctcagcatccgtggcgaatacaccctggtcgatctgccg
gacggcatgccgcgcgaggtattcgatcacctcggcaatgtctgggtcgcccagcgccag
ctgaagatccatgaatgggacggcaccgaatcacctgacgccggcggttctgccccgcca
cgtcgcggcggtggcggctatggcaagggccgccccggcggtcgcggtccgcgcccgaag
ttctcgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system