KEGG T00953: FIC

Flavobacteriaceae bacterium: FIC_01805

Entry

FIC_01805 CDS T00953

Definition

DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

fba Flavobacteriaceae bacterium

Pathway

fba03410	Base excision repair
fba03420	Nucleotide excision repair
fba03430	Mismatch repair
fba03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:fba03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:fba03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:fba03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:fba03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C SpoOE-like

Other DBs

NCBI-GI:

255535939

NCBI-GeneID:

8257229

UniProt:

C6X1D5

Position

complement(1939961..1941541)

AA seq 526 aa
MKHFAELISSLESSNKTTAKVDAMVHYLRTAPENDKLWFLALFTGKRPKRPVNTNLLRQW
ALEIIQLPEWLFLESYSSVGDLGETISLILPPPQNDISKSLSQWMDELGDLAHKTEAEKK
AYVTESWNGLDYTERFIFNKLIGGSFRIGVSKKLLISALSKYSEIDSSQLMHSIMGKWDI
NEINFEDLIAGININPDNSKPYPFCLAYPLEKETDELGDPAEWQAEYKWDGIRGQLIRRN
DEVFIWSRGEELVTPQFPEIVSALEKMTGNFVIDGEILAVTEKGVLNFNELQKRLNRKTI
SAKMLKEIPVKVFAYDILERDDEDLRGKPLTYRRKILEELIHSQAPENITLSDIVPFQKW
EDLVEVRDNSRLNNSEGLMLKHKESLYHSGRKKGDWWKWKVDPLTIDAVLIYAQKGSGRR
SGYYTDYTFAVKKEDQLVTVAKAYSGLTDKEIMEVSRFVTKNSLEKFGPVRTVKPELVFE
IAFEGIGLSNRHKSGVALRFPRILRWRRDKKADEIDDIEEVKKLIR

NT seq 1581 nt +upstreamnt +downstreamnt
atgaagcattttgcagaactcatatcatccctcgaaagcagtaataaaaccaccgctaaa
gttgatgcgatggtgcattatctgcgcaccgctccggagaatgacaagctgtggtttctc
gcacttttcacaggtaaacggccgaaacgtccagtaaataccaatttgctgagacaatgg
gcgctcgagattattcagctgcctgaatggctttttctagaaagttattcctcagtcggc
gatctcggcgaaaccatttcactcatacttccgccgcctcaaaacgacatcagcaaatcg
ctgtcgcagtggatggatgaactgggtgatcttgcccataaaaccgaagcggaaaagaaa
gcctacgtcaccgaatcctggaacggcctcgattacaccgaacggtttatcttcaataaa
ctcattggcggaagtttccgcatcggggtttcaaaaaaacttctgatcagtgcgctctca
aaatactccgaaatagattccagccagctgatgcacagcattatgggcaaatgggacatc
aatgaaattaattttgaagacttaatcgccggcatcaacatcaatcctgataattccaaa
ccttatccgttctgccttgcatatccgctcgaaaaggaaaccgatgagctcggcgacccc
gcagaatggcaggctgaatataaatgggacggaatccgcgggcaactgatacgtcgcaac
gacgaagtttttatctggtcgcgcggtgaggaacttgttactccgcagttccctgaaatt
gtttcagctcttgaaaaaatgacgggcaacttcgttatcgacggcgaaattctggccgtg
acggagaaaggcgtacttaatttcaatgaactgcaaaagcggctcaaccgtaagaccatt
agtgcaaaaatgctgaaggaaattccggtaaaagtttttgcctacgatattcttgagcgc
gatgatgaggatttacgaggtaaaccgctgacataccgcagaaagattctcgaagagctg
atccacagccaggcacccgaaaacattacactttccgacatcgtgccgtttcaaaagtgg
gaagacctcgtggaagtacgcgataattcgaggttgaacaacagcgaaggcctgatgctt
aaacataaagaatctctgtatcattcaggccgtaaaaaaggcgactggtggaagtggaaa
gttgatccacttaccatcgacgcggtgctgatctatgcccaaaaaggcagtggacgacgc
agcggctattacaccgattatacttttgcggtgaaaaaagaagaccagctggttaccgtt
gccaaagcctattcgggcctaaccgacaaagaaataatggaagtcagccgttttgtaacc
aaaaattcactcgagaagttcgggcccgtgcgcactgtgaaacctgagcttgtattcgaa
atcgcgtttgaaggaattggtctcagcaacaggcataaaagtggcgtcgcattgcgtttt
ccgcgaattctgcggtggcgtcgcgataaaaaagctgatgaaatcgatgatattgaagaa
gtgaaaaaactaatccgctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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