KEGG T01318: Fbal

Ferrimonas balearica: Fbal_2407

Entry

Fbal_2407 CDS T01318

Definition

Exonuclease RNase T and DNA polymerase III

Orthology

K02342

DNA polymerase III subunit epsilon [EC:2.7.7.7]

Organism

fbl Ferrimonas balearica

Pathway

fbl00230	Purine metabolism
fbl00240	Pyrimidine metabolism
fbl01100	Metabolic pathways
fbl03030	DNA replication
fbl03430	Mismatch repair
fbl03440	Homologous recombination

Module

fbl_M00260

DNA polymerase III complex, bacteria

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:fbl00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:fbl00240]
Genetic Information Processing; Replication and repair; DNA replication [PATH:fbl03030]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:fbl03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:fbl03440]

SSDB

Motif

Pfam:

RNase_T CAF1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2676808..2677479)

AA seq 223 aa
MDLQFPLARWRNKVPQFEAFYEAGGPRSGADYREQPMLALDLELTGLDVRQDAILSIAAV
PIIRGRLVLAQSWHQLVSIDGGVGQSATIHGIHDRHLTDAQPLEQALLALLPQLAGRVLV
CHHGGLDLGFLQAGFQHHFGQGLPLKVIDTLKIEQRRLERQGTVLKADSLRLAQCRRRYG
LPDYPGHHALVDAIACGELLLAQASALAGRRPLSIGNLLAMSR

NT seq 672 nt +upstreamnt +downstreamnt
atggacctgcagtttcccctggcgcgctggcgcaacaaggtgccgcagtttgaggcgttc
tatgaggcgggcggcccgcgcagcggtgcggattaccgtgagcaaccgatgttggcactg
gatctggagctgaccggactcgacgtccgccaggacgccattctctccattgccgctgtg
cccattatccgggggcggctggtgctggcccaaagctggcatcagttggtgtccatcgat
ggtggtgtggggcagagtgccaccatccacggcattcatgatcgccacctgaccgatgct
caaccgctggagcaagccttgctggcgttactgccacagctggccgggcgggtgctggtg
tgtcatcacggaggccttgacctgggatttcttcaggcgggtttccagcaccactttggc
caggggttgccgctgaaggtgatcgacaccctgaagattgagcagcgtcggctggagcgt
cagggcacggtactgaaggcagatagcctgcgcctggctcagtgccggcgtcgctatggt
ttaccggattaccccggccaccacgcgttggtggatgccatcgcctgtggcgagctgttg
ctggcccaggccagcgcgctggcggggcgtcgtcccttaagcatcggcaacctgctggcg
atgagccggtag

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-FBL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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