KEGG T01318: Fbal

Ferrimonas balearica: Fbal_2407

Entry

Fbal_2407 CDS T01318

Definition

Exonuclease RNase T and DNA polymerase III

Orthology

K02342

DNA polymerase III subunit epsilon [EC:2.7.7.7]

Organism

fbl Ferrimonas balearica

Pathway

fbl00230	Purine metabolism
fbl00240	Pyrimidine metabolism
fbl01100	Metabolic pathways
fbl03030	DNA replication
fbl03430	Mismatch repair
fbl03440	Homologous recombination

Module

fbl_M00260

DNA polymerase III complex, bacteria

Brite

KEGG Orthology (KO) [BR:fbl00001]
Metabolism
  Nucleotide metabolism
   00230 Purine metabolism
    Fbal_2407
   00240 Pyrimidine metabolism
    Fbal_2407
Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Fbal_2407
   03430 Mismatch repair
    Fbal_2407
   03440 Homologous recombination
    Fbal_2407
Enzymes [BR:fbl01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Fbal_2407
DNA replication proteins [BR:fbl03032]
Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Fbal_2407

SSDB

Motif

Pfam:

RNase_T CAF1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2676808..2677479)

AA seq 223 aa
MDLQFPLARWRNKVPQFEAFYEAGGPRSGADYREQPMLALDLELTGLDVRQDAILSIAAV
PIIRGRLVLAQSWHQLVSIDGGVGQSATIHGIHDRHLTDAQPLEQALLALLPQLAGRVLV
CHHGGLDLGFLQAGFQHHFGQGLPLKVIDTLKIEQRRLERQGTVLKADSLRLAQCRRRYG
LPDYPGHHALVDAIACGELLLAQASALAGRRPLSIGNLLAMSR

NT seq 672 nt +upstreamnt +downstreamnt
atggacctgcagtttcccctggcgcgctggcgcaacaaggtgccgcagtttgaggcgttc
tatgaggcgggcggcccgcgcagcggtgcggattaccgtgagcaaccgatgttggcactg
gatctggagctgaccggactcgacgtccgccaggacgccattctctccattgccgctgtg
cccattatccgggggcggctggtgctggcccaaagctggcatcagttggtgtccatcgat
ggtggtgtggggcagagtgccaccatccacggcattcatgatcgccacctgaccgatgct
caaccgctggagcaagccttgctggcgttactgccacagctggccgggcgggtgctggtg
tgtcatcacggaggccttgacctgggatttcttcaggcgggtttccagcaccactttggc
caggggttgccgctgaaggtgatcgacaccctgaagattgagcagcgtcggctggagcgt
cagggcacggtactgaaggcagatagcctgcgcctggctcagtgccggcgtcgctatggt
ttaccggattaccccggccaccacgcgttggtggatgccatcgcctgtggcgagctgttg
ctggcccaggccagcgcgctggcggggcgtcgtcccttaagcatcggcaacctgctggcg
atgagccggtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-FBL (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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