KEGG   Ferrimonas balearica: Fbal_2417
Entry
Fbal_2417         CDS       T01318                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
fbl  Ferrimonas balearica
Pathway
fbl03030  DNA replication
fbl03410  Base excision repair
fbl03420  Nucleotide excision repair
fbl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fbl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Fbal_2417
   03410 Base excision repair
    Fbal_2417
   03420 Nucleotide excision repair
    Fbal_2417
   03430 Mismatch repair
    Fbal_2417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fbl03032]
    Fbal_2417
   03400 DNA repair and recombination proteins [BR:fbl03400]
    Fbal_2417
Enzymes [BR:fbl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Fbal_2417
DNA replication proteins [BR:fbl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Fbal_2417
DNA repair and recombination proteins [BR:fbl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Fbal_2417
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Fbal_2417
   MMR (mismatch excision repair)
    DNA ligase
     Fbal_2417
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Fbal_2417
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT Bep_C_terminal 5_3_exonuc HHH RUBY_RBDX
Other DBs
NCBI-ProteinID: ADN76619
UniProt: E1SMV0
Position
complement(2686300..2688357)
AA seq 685 aa
MCFLPPKNDMSQAKDRIEQLSQLLNDYNHQYYVLDNPSVPDAEYDRLMRELQALEAEHPA
LRQPDSPTQRVGGAPAGQFQSVAHLKPMLSLDNAMNEEEFSAFHQRLADRLGSGDIQYCA
EPKLDGIAVSLIYRDGLLERAATRGDGTTGEEITTNVRTIKSVPLRLSGKGYPALLEVRG
EAFMPKAGFEAMNAKAMAAGEKTFVNPRNAAAGSLRQLDSRITANRPLAFYAYAVGVVEG
IDTAMADSHSGQLAQLAQWGLPVSPIVETAAGEAAALDYFRRIGQQRPDLPYEIDGVVIK
VDSLAQQEQLGFVARAPRWAIACKFPAQEEMTLLKDVEFQVGRTGAVTPVARLEPVFVGG
VTVSNATLHNADEIARLGVKIGDTVIIRRAGDVIPQIVSVVAERRPDDARDIEFPSACPV
CASKVERFEGEAVARCSGGLFCEAQRKEAIKHFASRKALDVDGLGDKLVELMVDRELVAT
PADLFTLSASRLTMLPRMGTKSAQNLVAALDQARTTTLPRFLYALGIREVGEATAANLAR
HFQTLEALMAADTDALIEVDDVGEVVAKHVYYFFRQPHNLEVIQALTDTEGANVHWPAIE
AVAEEAQPLKGQTWVLTGTLSQMGRSEAKAALEALGAKVSGSVSKNTDTLVAGEKAGSKL
TKATDLGVPVLDEDGLVALLAQYNG
NT seq 2058 nt   +upstreamnt  +downstreamnt
gtgtgtttcttaccgccgaagaacgacatgagccaagccaaagaccgcattgaacagctc
agccagttgctgaacgattacaaccaccagtactacgtgctggacaacccctccgttccg
gatgcggaatatgaccgcctgatgcgcgaactgcaggccctggaagcggaacatccagcg
ctgcgtcagcccgattccccgacccagcgggttggcggtgcgccggcaggccagttccag
tcggtagcccacctcaagccgatgctgtccctcgataacgccatgaacgaggaggagttc
tccgccttccatcagcgcctggcggaccgcctcggcagcggcgatatccagtactgtgct
gagccgaagctggatggcattgcggtcagcctgatctaccgtgatggtctgctggagcgc
gcggcaacccgcggtgacggcaccaccggcgaagagatcacgactaatgtccgcaccatc
aagtcggtgccgctgcgtctcagtggcaagggctacccggccctgctggaggtgcgtggt
gaagcctttatgcccaaggccggattcgaagcgatgaacgccaaggcgatggccgccggt
gagaaaacctttgtgaacccgcgcaatgcggcagcgggcagcctgcgtcaactcgacagc
cgcatcaccgccaaccggccgctggcgttctacgcctatgcggtgggcgtggttgagggc
atcgatacggcgatggccgacagccacagtggccagttggcccagttggcccagtgggga
ctgccggtcagccccatcgtggaaaccgccgctggcgaagctgccgcgctggattacttc
cgccgcattggtcagcagcgtccggacctgccctatgagatcgacggggtcgtgatcaag
gtggacagcctggcgcaacaggagcaactgggttttgtggcccgcgccccccgttgggcc
atcgcctgtaagttcccggcccaagaggagatgacgctgctcaaggacgtggagtttcag
gtgggccgcactggcgccgttaccccggtggcgcgactggagccggtgtttgtgggcggg
gttaccgtttccaacgccaccctgcacaacgccgatgagattgcgcgtcttggcgtcaag
attggcgacacggtgatcatccgtcgtgccggtgatgtgattccgcagatcgtctccgtg
gtggccgaacgccgtccggatgacgcccgcgatatcgaattccccagcgcttgtccggtc
tgcgcgtccaaagtggaacgctttgagggcgaagccgtggctcgctgttccggtggcctg
ttctgcgaagcccagcgcaaggaagcgatcaagcacttcgcctcccgcaaagcgttggat
gtggatggccttggcgacaagctggtggagctgatggttgaccgtgagctggtggccacc
ccggccgatctgttcaccctgtcggcctcccgcctgaccatgctgccgcgcatgggcacc
aaatctgcgcagaacctggtggcggcgttggatcaagcccgcaccacgaccctgccacgc
ttcctctatgcgctggggatccgcgaagtgggcgaggccacggccgctaacctggcccgt
cattttcagactctggaagcgctgatggccgctgataccgacgcgttaattgaagtggat
gatgtgggggaagtggtggccaagcacgtgtattacttcttccgtcagccccataacctg
gaggttattcaggcgctgaccgacaccgaaggcgccaacgtgcactggcccgccattgag
gcggttgctgaagaggcgcagccgctcaaagggcagacctgggtgctgaccggcacgctc
agccagatgggccgaagcgaggccaaagcggcgctggaagccctgggcgccaaagtcagt
ggcagtgtgtccaaaaacaccgacacgctggtggcgggcgaaaaggccgggtcgaagctg
accaaggccaccgatctcggggttccggtgctggatgaggatggcctggtggccctgctg
gcccagtacaacggctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (53)   

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