KEGG   Flammeovirgaceae bacterium 311: D770_24990
Entry
D770_24990        CDS       T04058                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
fbt  Flammeovirgaceae bacterium 311
Pathway
fbt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fbt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    D770_24990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fbt03400]
    D770_24990
Enzymes [BR:fbt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D770_24990
DNA repair and recombination proteins [BR:fbt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     D770_24990
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_C Helicase_C PriA_CRR nSTAND3 IstB_IS21 TsaE AAA_30 AAA_16 DUF6123 T2SSE
Other DBs
NCBI-ProteinID: AHM63243
UniProt: A0A0D3LN09
Position
6079579..6082101
AA seq 840 aa
MQQLEFNISEGGGERQTLFCDVLLPVPVPKLFTYRVPFDLNDTLLPGCRVVVQFGKKKIL
TGIVAEVHDRIPEAYDARLLLEQLDEQPIVQPVQLKLFQWMADYYMCTPGEVLNVALPTG
LKLSSQSQVQLHPDFSYRTTEHTFNEKEKLLLDSLQQNQSMSYADVEALLGQKTLYQLFK
NLLAKEAILLFEQVQEKYKPKTVRKVRLQEGLVQDRNSLEALFKALESHPKQSDVLLKYL
REVPVLQHPERNASGLTKAELVDAQISPSSVRTLVKNGVLEEFEETVPRFWIPDGDSSID
IRLTEDQQKARQQILEHFEDKDTVLLHGITGSGKTELYISLIREALDNGVQVLYLLPEIA
LTTQIVGRLKKIFGGQMGVYHSRFSDNERVEVWQGVLNGSFPLVVGVRSSIFLPFHNLGL
IIVDEEHETSYKQYDPAPRYHARDTALVLSKMHGGKTLLGSATPSVESYYQAENDKYGLV
ELTKRYADAQLPLIELADTRVAQKHKTMKAMFTQQLVEALKNVVERREQAIVFQNRRGYA
PYINCEECSWIPKCVNCAVSLTYHMQANELRCHYCGLKEYVPTACPACGSHKIKTVGYGT
EKLEESLRLLVPEATVERMDLDTTRRKNSFQTLFDSFGEGKIDILVGTQMVSKGLDFEGV
TLVGIFDADRMLHYPDFRSHERTYQLVTQVAGRAGRSKKPGKVIIQTSNLEQPILERIIQ
SDYGGVYRNEIRERREYFYPPFSRLIRLVVRHSEKDLAEAAAKELAARLQHKLGKERVLG
PEEPLVGRIRGLYLMHITIKLERQGIDMQGVKQFIAAQSQELVSQKDYKKVEVVPDVDPY
NT seq 2523 nt   +upstreamnt  +downstreamnt
gtgcagcaactggaatttaatatctctgagggtgggggtgagcggcaaacgcttttttgc
gatgtactgctgccggtgcccgtgccaaaactctttacctatcgtgtgccttttgacctg
aacgataccctgctaccgggttgccgggtggtggtgcagttcgggaaaaagaaaatatta
acgggtattgtggccgaggtgcacgaccgcatacccgaggcttatgatgcccgcctgctg
ctggagcagctcgatgagcagcctatcgtacagccggtgcagctgaagctgtttcagtgg
atggctgattattatatgtgtaccccgggagaggtactgaatgttgccctgcccacgggc
ctgaagcttagcagccagtcgcaggtacagcttcaccccgattttagctaccgcaccacc
gagcatacctttaacgaaaaggaaaagctgctgctggacagtttacagcaaaaccagagc
atgtcttatgccgatgtagaggcactgctggggcagaaaacactctaccagctgtttaag
aacctgctggcgaaagaggccatcctgctgtttgaacaggtgcaggaaaaatacaagccg
aaaacggtgcgcaaggtacgcctgcaggagggactggtgcaggaccggaatagcctggag
gccctgttcaaggctttagaaagccatcccaagcagtcggatgtgctgctgaaatacctg
cgcgaggtgccggtgctgcagcacccggagcgtaatgcaagcggccttaccaaggcagaa
ctggtagatgcacagatctcaccctcctcggtacgaaccctggtgaaaaacggggtgctg
gaggagtttgaagagaccgttccccgcttctggatacccgatggcgacagcagcattgac
attcgcctgacggaagaccagcaaaaggcccggcagcagatcctggagcatttcgaagac
aaggataccgtgctgctgcatggcattacaggctcgggtaaaacagagctctacatctcc
ctgatccgtgaggcgctggacaatggcgtgcaggtgctttacctgctgcccgagattgcc
ctcaccacccagattgtaggccggctcaagaagatctttggcgggcaaatgggggtgtac
cacagccgtttttctgataacgaacgggtggaggtttggcagggggtgctgaatggcagc
tttccgctggtggtgggggtgcggtcttccatcttcctgccctttcacaacctgggtctg
attattgtggatgaagagcacgagacctcctacaagcaatatgatcctgccccgcgttac
catgcccgcgatacggccctggtgctctccaaaatgcatggcggcaaaaccctgctaggt
tcggccacgccttctgtagaaagctactaccaggccgaaaatgataagtatgggctggtg
gagctgaccaaacgttatgccgatgcccagctgcccctgatagagctggccgatacccgc
gtggcacagaagcacaaaaccatgaaggccatgtttacccagcagctggtggaggccctg
aagaatgtggtggagcgcagggagcaggccattgtcttccagaacaggaggggctatgcg
ccctacatcaactgcgaggaatgcagctggatacccaaatgtgtaaactgtgccgtaagc
cttacctaccacatgcaggccaatgaacttcgctgccactattgcggactcaaggagtat
gtaccaacggcctgcccggcctgtggctcgcataaaataaaaactgtgggctatggcacc
gaaaagctggaggaaagcctgcgcctgctggtgcccgaggctaccgtagagcgtatggac
ctggacaccacccgccgcaaaaacagcttccaaaccttgttcgatagctttggagagggt
aagatcgatatcctggtaggtacccagatggtaagcaaaggcctggattttgagggcgta
acactcgtgggcattttcgatgccgaccgcatgctgcactaccccgatttccgctcgcac
gaacgtacctaccagctggtaacccaggtggcgggccgggcagggcgcagcaagaagccg
ggcaaggtgatcatccagacctcgaacctggagcagcctatcctggagcgcatcatccag
tcggattacggaggggtgtaccgcaacgagatccgggagcggcgggagtatttctacccg
cccttcagcaggcttatcaggctggtggtgcggcatagcgaaaaagacctggccgaagcg
gctgccaaagagctggcagcccgcctgcagcataagctgggcaaagagcgggtgctgggg
ccggaagaacccctggtgggccgcatcaggggcctgtacctgatgcacattaccatcaag
ctggagcgccagggcatcgacatgcagggcgtaaaacagtttattgcagcgcaaagccag
gaactcgtgagccagaaagactataaaaaagtagaggtagtacccgatgtagatccttat
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (45)   

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