KEGG   Felis catus (domestic cat): 101082303
Entry
101082303         CDS       T02385                                 
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
fca  Felis catus (domestic cat)
Pathway
fca01524  Platinum drug resistance
fca03430  Mismatch repair
fca05200  Pathways in cancer
fca05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101082303 (MSH6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101082303 (MSH6)
  09162 Cancer: specific types
   05210 Colorectal cancer
    101082303 (MSH6)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    101082303 (MSH6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fca03400]
    101082303 (MSH6)
DNA repair and recombination proteins [BR:fca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101082303 (MSH6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II HORMA MUM1-like_PWWP WPP
Other DBs
NCBI-GeneID: 101082303
NCBI-ProteinID: XP_003984017
EnsemblRapid: ENSFCTG00005009864
UniProt: M3W729
Position
A3:67181009..67202718
AA seq 1359 aa
MSRQSTLYSFFPKSPALNNANKASVRASGEGGGAAAATRASASPGGDAAWSEAEAGPLAG
SASPPEARNVNGGLRKSAAPAVPPSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRADE
ALNKDKIERLELAVCDEPSEPEEEEEMEVGATYSSDKSEEDKEIESEEEVPPKVQGSRRS
SRQIKKRRVISDSESDVGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVASKRK
KMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSAFSAPQNSESQAHTGGGCEDSSR
PTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVIFYKVGKFYELYHMDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLLS
LKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNL
STETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEAYFKEKLNDSGVMLPQVLKGM
TSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATRP
GAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL
CSPYAINDRLDAIEDLMAVPDKISDVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSRA
IMYEETTYSKKKIIDFLSALEGFKVICKIIETMEEVADNFKSKILKQVITLQTKNPEGRF
PDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSRI
GCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAE
ERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILFP
EEDTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEEESGKAYCVLVTGPNMGGKS
TLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASIL
THATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVA
VRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEIIQKGHRKAR
EFEKMTQSLRLFREVCLASERSTIDAEAVPKLLTLIKEL
NT seq 4080 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcgctgaataatgct
aacaaggcctcggtcagggcctcaggtgaaggcggtggtgccgccgctgctacccgggcc
tccgcttctcccggcggggatgcggcctggagcgaggccgaggctgggcccctagcgggc
tctgcgtcgccacccgaggcgaggaacgtcaatggagggctgcggaagtcggccgcgccc
gcggtcccccccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggag
ggttacccctggtggccttgcctggtttataaccacccttttgatggaacattcatccgc
gagaaagggaagtctgtccgagttcatgtacagttttttgatgacagcccaacaaggggc
tgggttagcagaaggctattaaagccatatacaggttcaaaatcaaaagaagcacaaaaa
ggaggtcatttttatagttcaaagcctgaaatactcagagcaatgcaacgtgcagatgaa
gccttgaataaagacaagatcgagaggcttgaattggcagtgtgtgatgagccctcagaa
ccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagtgaagaa
gataaggaaattgaaagtgaagaagaagtgccacctaaggtgcaaggatctaggcgaagt
agccgccagataaaaaaacgaagggtcatatcagactctgagagtgatgttggtggctct
gatgtggaattcaagccagatgctaaggaggaaggaagcagtgatgaaataagcagtgga
gtgggggacagtgacagtgaaggcttggacagccctgtcaaagttgcttcaaaacggaag
aaaatggtgtctggaaatggcgctctcaaaaggaaaagttcaaggaaggaaatgcccttg
gccaccaaacgatcaactggcatttcatcagaaaccaagagcactctgagtgctttctct
gcccctcagaattctgaatctcaagcccacactggtggaggatgtgaggatagtagtcgc
cccactttctggtatcatgaaactttagagtggcttaaggaggaaaagagacgagatctc
cacaggaggcgacctgatcaccccgattttgatgcatccacactctatgtgcctgaggat
ttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgttattttttataaggtggggaagttttatgagttgtaccacatggatgctctt
gttggagtcaatgaactcgggctggtattcatgaaaggcaactgggctcattctggtttc
cctgaaattgcatttggccgatactctgattctctggttcagaagggctataaagtagca
cgagtggaacagactgagaccccggaaatgatggaggcacgatgccggaagatggcacat
atatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaagggtaca
cagacctacagtgtactggaaggtgacccctctgagaactacagtaagtatcttcttagc
ctcaaagaaaaagaggaggattcctctggccacactcgagtgtatggagtatgctttgtt
gatacctcactgggaaagtttttcataggtcagtttccagatgatcgccactgttctaga
tttaggactctagtggcacactaccctccagtacaagtcttgtttgagaaaggaaatctc
tcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggtctg
ataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaagca
tattttaaggaaaagttaaatgacagtggggtgatgttaccccaggtgcttaaaggtatg
acctcagagtctgattctcttgggttaacaccaggagagaagagtgaattggccctctct
gctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagcttttatca
atggctaattttgaagaatacattcccttggattctgacagggttagtgctacaagacct
ggtgctgtttttgcaaaagccaatcaacggatggtgctagatgctgtgacattaagcaac
ttggagattttcctgaatggaacaaatggttctactgaagggaccctgctagaaaagatt
gatacttgccatactccctttggtaagcggctcctaaagcagtggctttgtgccccactc
tgtagcccttatgctatcaatgatcgtttagatgctatagaagacctcatggctgtgcct
gacaaaatctctgatgttgcagaccttctaaagaagattccagaccttgagaggctgctg
agtaaaattcataatgttgggtctcccctgaagagccagaaccacccagatagcagggct
ataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgctcta
gaaggattcaaagtaatatgtaaaattatagagactatggaagaagttgctgacaacttt
aagtctaaaatccttaagcaagtcattactttgcagacaaaaaatcctgagggccgtttt
cctgatttgactatagaactgaaccgatgggatacagcctttgaccatgaaaaggctcga
aggactggactaattactcccaaagcaggatttgaccctgattatgaccaagctcttgct
gacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagtcgaatt
ggctgtaggaccattgtctactgggggattggcaggaaccgttaccagttggaaattcca
gagaatttcatcactcgtaatttgccagaagaatatgagttgaaatccaccaagaagggc
tgtaaacgatactggaccaaaactattgagaagaagttggctaatctgataaacgctgaa
gagcggagagacgtatcgttgaaagactgcatgcggcgactcttctataactttgataaa
aattacaaggactggcagtctgctgttgagtgcatcgcagtattggatgtcttactgtgc
ctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctgtttcca
gaagaagacacaccccccttcttggaccttagaggatcacgtcatccctgcattacgaag
actttttttggagatgactttattcctaatgacattctaataggctgtgaggaagaggag
gaggaaagtggcaaagcttattgtgtgcttgttactggacctaatatggggggcaagtcg
acactcatgagacaggctggcctgttagctgtaatggcccagacgggttgttacatacct
gctgaagtatgcaggctcacacctattgatagagtatttactagacttggtgcctcagac
agaataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagtatcctt
acacacgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgcaaca
tttgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaacataaagtgt
cgtacattgttttctacccattaccattcattagtggaagattattctcaaaatgttgca
gtgcgcctgggacacatggcatgcatggtagaaaatgaatgtgaggatcccagccaggag
actattaccttcctatataaattcattaagggagcttgtcctaaaagctatggctttaat
gcagcaaagcttgctaatcttccagaggagattattcaaaagggacatagaaaagcaaga
gaatttgagaagatgacccaatcactgcgattatttcgggaagtttgcctggctagtgaa
aggtcgactatagatgctgaagctgtccctaagttgctgactttgattaaggaattatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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