KEGG   Felis catus (domestic cat): 101092053
Entry
101092053         CDS       T02385                                 
Symbol
DDX50
Name
(RefSeq) ATP-dependent RNA helicase DDX50 isoform X1
  KO
K13183  ATP-dependent RNA helicase DDX50 [EC:5.6.2.7]
Organism
fca  Felis catus (domestic cat)
Brite
KEGG Orthology (KO) [BR:fca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fca03041]
    101092053 (DDX50)
Enzymes [BR:fca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101092053 (DDX50)
Spliceosome [BR:fca03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101092053 (DDX50)
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII CMS1 ERCC3_RAD25_C AAA_30
Other DBs
NCBI-GeneID: 101092053
NCBI-ProteinID: XP_003994042
EnsemblRapid: ENSFCTG00005014350
UniProt: M3XBG7
Position
D2:30011844..30044162
AA seq 739 aa
MMPGKLLWGDIMELEAPLEETESQRKERQKSDRRKSRHHYDSDEKSETRENGVADNLDAP
KPKKAKMKEKLNGDTEEGCNNRLSDEFSKSHKSRRKDLSNGDIDEYEKKSKRVSSLDSST
HKSSDNKLEESLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLI
AQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKL
SVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDL
GFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKA
ATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCL
HGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGR
TGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVS
YAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEI
QDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSLP
AKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGR
RRSGNRNRSRSGGHKRSFD
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgatgcctgggaaactcctctggggggacattatggagctggaggcacccttggaggag
acggagagccaaaggaaggagaggcaaaagagtgatagaaggaaatcaaggcaccattat
gactcagacgagaaatcagaaacaagagaaaatggtgtggcagataacttggatgctccc
aagcccaaaaaagctaaaatgaaagagaagctaaatggagacactgaagaaggatgtaat
aatagactttcagatgaattttctaaatctcataagtcaagaaggaaagatctgtcaaat
ggagatattgatgaatatgaaaaaaaatcaaagcgagtgtcatccttagatagttctact
cataaatcaagtgataataaactagaggagagcctaacacgtgaacagaaagaaggagcc
ttctccaatttccctatttctgaagaaactataaagcttctaaaaggtcgaggggtaaca
tatctctttcctattcaagttaagacctttggtcctgtatatgaaggaaaagatttaatt
gctcaagcacggacaggaacaggaaagacattttcttttgctatccccttgattgaaaga
ctccaaagaaatcaagagacaattaaaaaaagccgctcaccaaaggtacttgttttggct
cctacaagggaactggcaaaccaagtagccaaagacttcaaagatatcactaggaaactc
agtgtggcgtgtttttatggtggaacatcctatcaaagccaaattaatcatattcgaaat
ggtattgacatcttggttgggactcctggtcgtatcaaagaccatctgcagagtggccga
ttagatctttctaaactgcgccatgttgtacttgatgaagtggatcaaatgttagattta
ggatttgctgaacaagttgaagatatcatccatgaatcctacaaaactgattctgaagac
aatcctcagactttacttttttctgcaacttgcccacaatgggtatacaaagttgcaaaa
aaatacatgaaatccagatatgaacaggttgaccttgttggaaaaatgactcaaaaggct
gcaactactgtggaacatttggccatccagtgccattggtctcagaggccagcagttatt
ggagatgtccttcaagtctacagtgggtctgaagggagggctattattttctgtgagacc
aaaaagaatgtaactgaaatggccatgaatccacacataaaacagaatgcccagtgttta
catggggacatagcacagtcacaaagagaaattaccctgaaaggcttcagagaaggtagt
tttaaagttctggtggcaaccaatgtggctgcccgtggtttggacatacctgaggtggac
ctggtgattcaaagttctcctccccaggatgttgagtcctatattcatcgttctggacgc
acaggtagagctggccggacagggatttgcatatgtttttatcaaccaagagaaagaggt
caactacgatatgtggaacaaaaagcaggaattacttttaaacgtgtaggtgttccttct
acaatggatttagttaaatctaaaagcatggatgccatcaggtctctggcttccgtttct
tatgctgctgttgattttttccgaccatcagctcagagattgattgaagagaaaggggca
gttgatgcattggctgcagcattagcccacatctctggtgcatcaagttttgaaccacga
tctttgatcacctctgataaggggtttgtgaccatgactctggaaagcccagaagaaata
caagatgtcagttgcgcttggaaagaacttaacagaaagctgagtagtaatgctgtgtcc
caaattaccagaatgtgcctcctaaaaggaaatatgggtgtttgctttgacgttcctaca
actgagtcagaaaggttacaggcagagtggcatgattcagactggatactttcattgcca
gcgaagttacctgaaattgaagaatattatgatggaaacacatcttctaactccaggcag
aggagtggctggtcaagtggccggtctggccgatctggccggtcaggtggtcgatctggt
ggccggtcaggtagacagagtcgacaggggagtcggtcaggaagtcgacaagatggtaga
agacgaagtgggaatagaaatcgatcaagaagcgggggccacaaacggagttttgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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