KEGG   Folsomia candida: 110852026
Entry
110852026         CDS       T05043                                 
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1-like
  KO
K10754  replication factor C subunit 1
Organism
fcd  Folsomia candida
Pathway
fcd03030  DNA replication
fcd03410  Base excision repair
fcd03420  Nucleotide excision repair
fcd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fcd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110852026
   03410 Base excision repair
    110852026
   03420 Nucleotide excision repair
    110852026
   03430 Mismatch repair
    110852026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcd03032]
    110852026
   03400 DNA repair and recombination proteins [BR:fcd03400]
    110852026
DNA replication proteins [BR:fcd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110852026
DNA repair and recombination proteins [BR:fcd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110852026
SSDB
Motif
Pfam: RFC1 AAA BRCT PTCB-BRCT Rad17 RNA_helicase nSTAND3 AAA_22 BRCT_2 RuvB_N AAA_14 AAA_17 AAA_5 AAA_7 DNA_pol3_delta
Other DBs
NCBI-GeneID: 110852026
NCBI-ProteinID: XP_021955679
Position
Unknown
AA seq 969 aa
METHSTSTPLTAAQANLERYRKFRADGHQVQSIVTPSDFEYYLKLHKRQEDRVQAAENLI
PELEAENLMQQHKEGYYYTSDGNERSIIQYIKGDMNGLGHRSYGYVWRQGDTFEIEDVYV
GTSKSTAQETARNKWTKLGSTLTSGCNDRYMYKKGFFFCPEEAFEITGFVTDRDWIAKDL
KMYARAECGAVASLVSKNAYISLQEFRYQLSQGLKNSNHLWLDPPTTSVVTGGLSQSPSR
RSSPRKSSSRPQVSSDSEPDFIPKKKSKPSTSRSSSKSDMTTKKSDKEKDSPVSKKASKK
EKEEKEEKPPLTEEEKKKKASNFAKLLAHQSSKPRHLGEKRLPIGAKDCLAGLTFVPTGV
LDSLERDSCKTLVEKYGGRVTTAISKKTTHLIVGDDPEVMKLLGAVKQRITIVYESNLLE
MIRVSNPDGNNNEEEEVIEMLDLGDSEALPPPPPPTLMWVDKYKPKTMKQIVSHGKDTGN
ATKLVRWLTNWFKYHGKANDKAKTNPPGFRDPEGKTYKCALFSGPPGIGKTTTAHLACKK
VGYDYFELNASDTRNKKGLHQIVSDALSCKTMYGGINDLTKQHVLIMDEVDGMSGNEDRG
GIQELIGLIKTSRVPVICICNDRNHPKIRSLANYCFDLRFNKPTIXELKALVATISFREK
LKIDPQRVIQLCISTDMGIRQIIHTLELYKDTNAENVSAPKKDLRFGPWDVCRKVFLNPE
HEMKNIHEKTGLFFQDYSIGSLFIQENYLKMVPVKAKQKYSEAIDGHRQLELIARIAAAI
SLGDVAETMIQKTNNWSLLPVQGIFSSYIPGELMESNLCGNIEFPSWLGKNSNKNKRQRL
LQSLHTHVHLQVSASLEALNMDYLPYLRRKICTRLGSDDVTAAAEVMETYSLRRDDFDSL
NDLGHWPGMKNPLKHVDSVTKTAFTRMVNKQVLPYATDKLVNKGRKTATDIEGYGEEAEE
VCGVSEEDE
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggagacacattcaacttctactcctctgaccgctgcacaagcaaatctggaaagatac
agaaagtttcgagcggatggccatcaagttcagagtatcgtgacaccaagtgatttcgag
tactacctaaaattacacaaacggcaggaagatcgagttcaagctgcggaaaatttgata
cctgaactcgaagccgaaaatcttatgcagcaacacaaagaaggttattattacacatct
gatggaaatgaacgaagtataatacaatatatcaaaggagacatgaacggtttaggtcat
cggtcgtacgggtacgtttggcgacaaggagacaccttcgaaattgaagatgtttatgtg
gggacaagtaagagcaccgcacaggaaactgcccgcaataagtggaccaagctcggttca
actttaaccagtggctgtaatgatcgatatatgtacaagaagggattcttcttttgtcca
gaagaagcattcgagattactggatttgtgactgaccgagattggattgcaaaagatctg
aaaatgtatgcacgagcagaatgtggcgcagttgcctccttggtttcaaagaacgcgtac
attagcttacaggagtttcggtatcaattgagtcaagggctgaaaaattcaaaccaccta
tggcttgacccaccgacgacatctgttgtcactggaggtctcagtcagtcgccaagtcgc
cgttcttctccacgaaaatcatcgtcccgccctcaggtttcctctgattctgaaccagat
tttattcccaaaaagaaatcgaaaccaagcacatcacgatcttcgtctaaatcagacatg
accaccaagaagtctgataaagaaaaggattctccggtatcaaagaaagcatctaaaaaa
gagaaggaggagaaggaagagaaaccacccctcacagaggaggagaagaaaaagaaagca
tcaaactttgcaaaattgttagctcatcaatcatcgaagccacgtcatcttggagaaaaa
cgacttcccatcggggcgaaggattgtttggccggtctgacttttgtgcctacaggtgta
ttggactccttggagcgagattcttgcaaaaccttggtggaaaaatatggaggccgcgta
actacagctattagtaagaaaacgacccacttgattgtcggtgatgacccagaagtaatg
aaactattgggagctgtaaaacaacgaattacgattgtgtatgaatccaatttgctagaa
atgattcgtgtttctaatcctgatggaaataataacgaagaagaagaagttattgaaatg
ttggatttgggagattctgaagcactccccccacccccaccaccaactttgatgtgggta
gacaagtacaaaccaaaaacgatgaagcaaatcgtttcacatggaaaggacacgggaaat
gcgaccaaattggttagatggttaactaattggtttaaatatcatggaaaagccaatgac
aaggcaaaaacaaatcccccaggatttcgtgacccagaagggaaaacgtataagtgtgct
ttattctcggggccgccgggtattgggaaaaccactacagcgcatctggcatgcaaaaaa
gttggctatgattatttcgagctgaatgcatcagatacgcgaaataagaaaggtcttcac
caaatcgtttctgatgccctgtcctgtaaaaccatgtacggagggattaatgacctgacc
aagcagcacgttctgatcatggatgaagtggacggaatgagtggaaatgaagatcggggc
ggaattcaagagctcattggcttgataaaaacttctcgtgtcccagtgatctgcatttgt
aatgatcggaatcatccaaagatccgctcacttgccaattactgctttgatctccgtttt
aacaagccaaccatttaagaattgaaagcattggtggcgacgatatcattccgagaaaag
ttgaagattgatcctcagcgagttatccaactctgcatctcaaccgatatgggcattcga
caaattatccacacgttggaattgtacaaagataccaatgcagaaaatgtctctgctccg
aagaaagatttaagatttggaccgtgggacgtttgtagaaaagttttccttaacccagag
cacgaaatgaagaatattcatgagaagactggattgttctttcaagattattccatcgga
tcactgtttattcaagaaaattatcttaaaatggttccagtcaaagcaaagcaaaaatat
tcagaagcaattgatggacatcgtcagttggaattaattgcacgcatcgctgctgccatc
tcattaggtgatgtcgcggaaacaatgattcagaaaacgaataattggtcattgttaccc
gttcaaggaattttttctagctacatacctggagagttaatggaatcgaatttatgtggc
aacatagaattcccaagctggttgggaaagaattccaacaaaaacaagcgtcaacggtta
ctccaatcactgcacactcacgtccatcttcaagtcagtgctagtttggaagctctgaac
atggattatctaccttatcttaggagaaagatttgcactcgattaggcagtgatgatgtt
acagccgctgcggaagtcatggagacgtacagtttgagacgggatgactttgactcgctg
aatgatctcgggcactggccaggaatgaagaaccccctaaaacacgtggatagtgtcaca
aaaaccgcctttacgcggatggtaaataaacaagtgttgccatatgcgactgataagtta
gtcaataaagggagaaagactgctacggatattgaagggtacggtgaggaagcagaagaa
gtctgcggtgtttctgaggaggacgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (86)   

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