KEGG   Flavobacterium columnare: FCOL_01020Help
Entry
FCOL_01020        CDS       T01653                                 

Gene name
trpA
Definition
(GenBank) tryptophan synthase subunit alpha (EC:4.2.1.20)
  KO
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
fco  Flavobacterium columnare
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of antibiotics
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:fco00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    FCOL_01020 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FCOL_01020 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    FCOL_01020 (trpA)
Enzymes [BR:fco01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     FCOL_01020 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
complement(249865..250626)
Genome map
AA seq 253 aa AA seqDB search
MNRINIKLQENKKLLSLYFIAGYPSLNDTVHIIQELEKNGVDMIEIGLPFSDPLADGPTI
QESSTIALENGMTSALLFEQLATIRQTVQIPLLIMGYLNPILQFGVEKFCQQCAQVGIDG
LIIPDLPLEIYQQEYQTIFEKYGLKNIFLITPQTSDERIRQIDAVSNSFIYMVSTASVTG
SQTGFGEEQMAYFERIAKMQLNNPQVIGFGISDAKTFQHATTHQQGAIIGSAFIKHLTAN
GVDGIGNFIKKIR
NT seq 762 nt NT seq  +upstreamnt  +downstreamnt
atgaacagaataaacataaaattacaagaaaataaaaaactcctttccctttattttata
gcgggatatccaagtttaaacgacaccgtacacatcatccaagaactagaaaaaaatgga
gtcgatatgattgaaattggattaccgtttagtgatcctttagccgatggtcccaccata
caagaaagttcgaccatcgccttagaaaacggcatgacttctgccctactatttgagcaa
ttggcaaccattcgtcaaacggtgcaaattccgttattgattatggggtatttgaatccg
atactgcaatttggcgtagaaaaattttgtcagcaatgcgcccaagtaggcattgatggt
ttaatcatccccgatttacctttggagatataccaacaagaatatcagactatttttgag
aaatacggcttaaaaaacatctttttaatcactccgcaaaccagtgacgaacgtattcgc
cagatcgatgctgtttccaatagttttatctatatggtcagtaccgcaagcgttacgggt
agtcaaacgggctttggcgaagagcaaatggcgtattttgaacgaattgctaaaatgcaa
ctcaacaacccacaagtgattggctttggaatttctgatgctaaaacgttccaacatgcc
actacgcaccaacaaggtgccattataggtagcgcgtttatcaaacatttaaccgctaat
ggtgtggatggtattggaaattttattaagaaaatacgataa

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