KEGG   Fragilariopsis cylindrus: FRACYDRAFT_148780
Entry
FRACYDRAFT_148780 CDS       T04784                                 
Name
(GenBank) Nucleotidyltransferase
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FRACYDRAFT_148780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcy03019]
    FRACYDRAFT_148780
   03016 Transfer RNA biogenesis [BR:fcy03016]
    FRACYDRAFT_148780
Enzymes [BR:fcy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     FRACYDRAFT_148780
Messenger RNA biogenesis [BR:fcy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     FRACYDRAFT_148780
Transfer RNA biogenesis [BR:fcy03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    FRACYDRAFT_148780
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 Polbeta TUTase
Other DBs
NCBI-ProteinID: OEU20356
JGI: 148780
UniProt: A0A1E7FQC5
Position
Unknown
AA seq 350 aa
VPPWMGGRVDYRRINPMVAFHNEIVSFCRLMEPKPKEMKTREELTASFTALAKSVFPDCK
VEVFGSQATGLCLPTSDIDIAIQLNEKEEQTINGDDNKTEKKINDMENWNEPTGSPLQLL
AGALREHWLDDLSYLEVIEKTRIPLVKFTHAPTNISIDVCFNQTSGVQAAALMRQYMQAI
PPFRPLTFVLKKFMASRGLNQPYTGGVGSFLLQMMMLAFLQHRERDAFNNQRPSIYNLGA
LLVEFFEFYTTDFNFILTGISVRFDGFFFPKGASDRRKNFWQPQRPFSVAMENPLDPTFD
VGSASFRIDLVQRSFDVAFKVLLCHVSEPLIPATSILATILTPSEEMWER
NT seq 1050 nt   +upstreamnt  +downstreamnt
gtgcccccttggatgggcggccgcgtagattatcgtcgcattaatcctatggttgccttc
cacaatgaaattgtttccttctgtagattgatggaaccaaaaccgaaagagatgaagaca
cgtgaagaattaactgccagctttactgctcttgcgaagtctgtttttcctgattgcaag
gtcgaagtttttggatctcaagctactgggttatgtttaccaacctcagatattgatatt
gccattcaactaaatgagaaagaagaacaaacaattaacggggatgataataaaacagag
aaaaaaataaacgatatggaaaactggaatgaacccactggatcgccgttgcaattacta
gctggagctcttcgagaacattggcttgatgacttatcctacctagaagtcattgaaaaa
actagaattccattggttaaatttactcatgctcctaccaatatctcgattgatgtatgc
ttcaaccaaacatcgggtgtacaagcagctgccttaatgcgtcaatatatgcaagccata
ccaccatttagaccgctcacatttgttttgaagaaatttatggcatctagagggttaaat
caaccctatactgggggtgttggtagcttcttacttcagatgatgatgttagcattccta
caacatagggaacgggacgccttcaataatcagcggccatcaatatataaccttggtgct
ttgctcgtggagttctttgaattttacactactgatttcaactttatactaacgggaatt
tctgttagatttgatggattcttctttccgaagggagcatctgatagaagaaagaatttc
tggcaacctcaacgacccttctcggtcgctatggagaatccactagatccaacttttgac
gtaggttctgcatccttccgtatcgatttagtccaaagatctttcgatgttgccttcaag
gtgctactatgtcatgtatctgagccattgataccagcgacgtcaatcttggctacgata
ctaacgccatcggaagaaatgtgggaacga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (70)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (86)   

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