KEGG   Fusarium graminearum: FGSG_05002
Entry
FGSG_05002        CDS       T01038                                 
Name
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
fgr  Fusarium graminearum
Pathway
fgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FGSG_05002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fgr03041]
    FGSG_05002
Enzymes [BR:fgr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     FGSG_05002
Spliceosome [BR:fgr03041]
 Complex C
  Other components
   Step II factors
    FGSG_05002
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C S1 HA2_N DEAD AAA_22 AAA_19 AAA_30 T2SSE nSTAND3 ABC_tran SRP54 AAA_16 PhoH TsaE
Other DBs
NCBI-GeneID: 23552199
NCBI-ProteinID: XP_011323481
UniProt: I1RM25
Position
3:861262..864849
AA seq 1195 aa
MDDLLNLELLSLVSKVTSEVQNHLGVGEKTVAEFLIAKRTECNSFDEFRDNLETSTPGLP
PSLVESIDRLVLALHPKFKGKAKDEQKEHPSRTLQEKEKVFSGLALPDKEPARDDGADAI
DDTLALLEGLEPKAKKEKPTRKRSRSPENDQKEFRRRRRDRSRSRERRKRDKYRSRSRSQ
ERGDEDWRDGYRDSRKDRRGRKRHDDDDRFRNAPAPEVDDSPQLHKVYQGHVTGLKDFGC
FVNLHNVKGRVDGLVHVSRMSTGQRVNHPSDLVTQGQEVWVKVTSLDKDQNGRDRVGLSM
KDVDQQNGQDLEPQVRMSTGANMEALGGGARDGFAEPSGMPRNDMGPPRRQKKRMTSPER
WEIRQLIASGVAKASDYPDLEEDYNATLRGDGELELEEDVDIEVREEEPPFLAGQTKQSL
ELSPIRVVKAPDGSMNRAAMSGTNLAKERKELKQQEADAAAKDEPKENLSQQWQDPMADP
DKRKFASDLRNARKNQPAEDVPEWKKAVIPKGQSLGKRTNMSIKDQRESLPVFAFRTQLI
KAVHENQILIVVGETGSGKTTQLTQYLAEAGFANDGMIGCTQPRRVAAMSVAKRVAEEVG
CKLGEEVGYTIRFEDCTSPSTKIKYMTDGMLQREILVDPDMSRYSCIMLDEAHERTIATD
VLFALLKKTLKRRPDMKVIVTSATLDADKFSAYFNECPIFTIPGRTFPVEVLYSREPESD
YLDTALVTVMQIHLTEPKGDILLFLTGQEEIDTACEVLFERMKALGPNVPDLIILPVYAS
LPTEMQSRIFDPAPPGSRKVVIATNIAETSITIDEIYYVVDPGFVKQNAYDPKLGMDSLV
VTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSTTILMLKAM
GINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLAKVLIA
AVDLDCAEEVLSIVSMLNIPTVFYRPKEKQSQADQKKAKFHDPHGDHLTFLNVYNSWKTS
GYSAPWCFENFIQARSMRRAKDVRDQIVKIMDRYKHPIRSCGRATEKVRRALCAGFFRNA
ARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHELVLTSKEYMHCTTSIEPKWLVE
AAPTFFKVAPTDRLSKRKKAERIQPLYNKFATEDDWRLSAQRKGGRGGGGGGTWG
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggatgacttgttgaatcttgagcttttgtcccttgtttcaaaggtgacttcagaagtg
cagaaccatctgggtgttggcgaaaagactgtagctgaattcctgattgccaaacgtaca
gaatgcaatagtttcgacgaattccgcgacaacctcgagacgtccactcccggcttgcct
cctagtcttgttgaaagtatagaccgactggtgctcgctttgcatcccaagtttaaaggc
aaagcgaaagacgaacaaaaggaacacccctcccgaacccttcaagagaaagaaaaggtc
tttagcggtcttgcgctacccgataaggaacctgcgcgcgacgatggagccgatgccatt
gacgataccctcgcgctcttggagggcctagaaccaaaggcgaaaaaagaaaaacccacg
agaaaacggagccgaagccctgagaacgatcaaaaagagtttaggagaaggagaagagat
agatcccgttcgagggaacgacgaaaacgagacaagtatcggtcaaggtcacgatcacaa
gaacgaggcgatgaagattggcgcgacggataccgcgattcgcgcaaagatcgacgaggt
cgcaaacgacacgacgatgacgatcgattccgcaacgccccggcgcccgaagtagatgat
tcaccgcagcttcacaaggtctatcaaggtcatgtcacaggtctgaaagactttggttgc
tttgtcaacttgcataatgtgaaaggacgagttgatggtttggttcacgtgtctcgaatg
tctacagggcagcgcgtcaatcatccttccgatttggtgacgcagggacaggaagtctgg
gtcaaggttactagtcttgacaaggatcaaaacggccgcgatcgagtgggattatcgatg
aaggatgttgatcagcagaatggacaggacttggagccacaagttcgtatgtcgacaggt
gccaacatggaagcactgggaggaggcgcaagagacggatttgcagagccaagcggaatg
cctcgaaacgatatgggtccccctcgacgacaaaagaagcggatgacttctcctgaaaga
tgggagattcgacaactgatcgcatccggagtggccaaggcttctgattatcccgacctg
gaggaagactacaacgccactctccgtggcgacggcgagctggagctggaagaggatgtc
gacattgaagtccgtgaggaagaaccacctttcttggctggacagaccaagcaatctctg
gagctctctccaattcgcgtcgtcaaggcaccagatggctctatgaaccgagcagcaatg
tcaggcaccaacttggcaaaagaacgcaaggagctgaaacaacaagaggccgatgctgct
gccaaggatgaacctaaagagaacctttctcagcaatggcaggaccccatggccgatccc
gacaagagaaagtttgctagcgatttgcgaaacgctaggaagaaccagcccgctgaggat
gtccccgaatggaaaaaggcagtcattcccaagggacaatcgctgggcaagcgtacaaat
atgagcatcaaggatcagagagagtctctgcctgtgtttgccttccgtactcagctgatc
aaggctgtccacgagaaccagatccttattgtcgttggagagacaggatccggaaagacg
acacaattgacgcaatatcttgctgaagccggcttcgccaacgatggtatgattggatgt
acgcaaccccgtcgtgttgccgccatgtcagttgccaaacgtgtagctgaggaagtcggc
tgcaagcttggtgaagaggttggatacacgattcgattcgaggattgcaccagcccgtcc
acaaagatcaagtacatgaccgatggtatgcttcagagagagattctggttgaccctgac
atgagccggtattcgtgcatcatgcttgacgaagcccacgaacgtaccattgccactgat
gtactgtttgctctcctcaaaaagaccttgaagcgtcgtcctgatatgaaggtaattgtc
acatcagcgacactcgacgcagacaaattctctgcatactttaacgaatgccccatcttt
actatccccggtcgaacctttcctgtcgaagtgctttactctagggaacccgaatctgat
tacctggatactgctctcgtcacggtgatgcagattcatcttaccgaacccaagggcgat
atcctgctcttcttgacaggccaggaagaaattgatacagcctgtgaggtcttgtttgag
agaatgaaagccttggggcccaacgtgccagacttgatcattctacccgtctacgcgtct
cttccaacagaaatgcagagtcgaattttcgatcccgctccgccgggcagtcgcaaggtt
gtcatcgccaccaatattgcagagacatccatcactattgacgagatttactacgtcgtc
gacccaggattcgtaaagcaaaatgcctacgatcccaagcttggtatggactcactggtt
gttacgcctatttctcaggcccaggcaaatcagagagctggtcgtgctggccgaacaggt
cctggaaagtgtttccgcctgtataccgaggcagcttaccagtccgaaatgcttccgacc
accatccctgaaatccaacgccagaacctgtctaccacgattcttatgctcaaggccatg
ggtatcaatgacctcctccactttgactttatggacccgcccccaattaataccatgctt
accgcgttggaggagctatacgccctcagtgctcttgatgacgaaggtctactcacgcgt
ttgggacgaaaaatggccgatttccctatggaaccttctctcgccaaggttcttatcgct
gctgttgatctcgactgcgccgaagaagtgcttagcattgtgtccatgctgaatatcccg
actgtcttttaccgccccaaggagaagcagtcccaggcagaccaaaagaaggcaaagttc
cacgacccccacggcgaccacttgactttccttaatgtgtacaactcttggaaaacgagt
ggctactcagcaccgtggtgttttgagaactttatccaggcgcgatccatgcgccgagcc
aaggatgtccgcgatcaaattgtcaagatcatggaccgatacaagcaccctataagatca
tgcggccgcgctacagaaaaggtccgtcgggctctctgcgcaggattctttcgcaacgcc
gcccgcaaggacccccaggagggatacaagacccttattgagggtactcccgtctatctg
catcctagctcggcactcttcggcaagcaagccgagtgggtcatctaccacgaacttgtc
ctcactagcaaggagtacatgcactgcacgacgagcattgagccgaaatggctcgttgag
gccgcgcccacatttttcaaggtcgcacctacggatagattgagtaagaggaagaaggcg
gagaggatccagccgctttataataaattcgctacagaggatgattggcgattgagtgcg
cagaggaagggtggtagaggtggtggtggtggaggtacttggggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (56)   

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