KEGG   Allofrancisella guangzhouensis: SD28_03460
Entry
SD28_03460        CDS       T03527                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
fgu  Allofrancisella guangzhouensis
Pathway
fgu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fgu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SD28_03460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fgu03019]
    SD28_03460
   03016 Transfer RNA biogenesis [BR:fgu03016]
    SD28_03460
Enzymes [BR:fgu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     SD28_03460
Messenger RNA biogenesis [BR:fgu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SD28_03460
Transfer RNA biogenesis [BR:fgu03016]
 Prokaryotic type
  tRNA degradation factors
   SD28_03460
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 KH_2
Other DBs
NCBI-ProteinID: AJC48761
UniProt: A0A0A8E9B5
Position
738604..740685
AA seq 693 aa
MKIYREVFELGNKKITLETGGMARQADGSVVVSCGNNVVLVTTAVKKTVADGADFFPLSV
HYLEKSYAAGKIPGGFTRREARPSEEQILISRLIDRSIRPSFPDGFFNEIQIVATVISYD
GSFSPDILALIGASASLAISGAPYDDVVAGIRVGYVNGKYILNPNKEDLKESALDLVVSG
TDDAILMVESEAKSLPESVMLGAVLYGHKHLRTIISSINKLVKVASKPRMEYRVYEINQV
LKQQIQSNFFGEIKNAYTVASKQDRNIKLAEIRKNVLEHVFSNDIDSNEYTEKEIIEAFH
SIEKDLVRSNILEGKPRIDGRCTETIRPINVKTGILPGVHGSALFTRGETQALVVTTLGS
DRDAQLVESLDGVEKARYMLHYNFPPYCVGECGMVGMAPKRREIGHANLAKRATNAVFPN
EEVYPYVVRIVSEILESNGSSSMATVCGSSLSMMDAGVPIAEPVAGIAMGLIKDGSRYAV
LSDILGDEDHLGDMDFKVAGTRYGVTALQMDIKIKGISREILEQALEQARVGRLHILGIM
NEVIREHKEDVSSGAPQIHILNVNPSKIKDIVGRGGSTIKAIIERTGAQIDTNDTGEVKV
FAKNKSSLDMAVKEIEAIVAEVEEGQVYKGKVVKILESGVFVNLMGDKDGYLSFQDIEQT
GIKSNSIIEGQGLEVIAQNIDRNGRVKLSLVAR
NT seq 2082 nt   +upstreamnt  +downstreamnt
gtgaaaatatatagagaagtctttgaattagggaataaaaagatcaccttagaaactggt
ggcatggctcgtcaggcagatggttctgtagtagttagttgtggcaataacgttgtacta
gtaactacagcagtcaaaaaaactgtagcagatggagcagactttttccctctttctgta
cactatttagaaaagtcgtatgcagctggaaaaattcctggagggtttacaagaagagaa
gctagaccttctgaggagcagattcttatttctagacttattgatagatctattagacca
tcatttccagatggcttttttaatgagatccaaatagtagctacagttatctcttatgat
ggtagtttttcaccggatatattagctttgattggagcatcagcttctttggctatatct
ggggcaccttatgatgatgttgtagctggtattagagtaggttatgttaatggtaaatac
attctaaaccctaataaagaagatttaaaagaatcagctttagatttggtggtttctggt
acagatgatgctattttaatggttgaatctgaagcaaaaagcttgccagaaagtgtaatg
ttgggagcagttctatatggacataaacatcttagaactataatttcgtctattaataag
ctagtaaaagtagcttctaaaccacgtatggaatatagggtttatgaaatcaatcaagtt
cttaagcaacagattcaatctaatttttttggcgaaattaaaaatgcttatacagtagct
tctaagcaagatagaaatattaaattagcagaaattagaaaaaatgtattagaacatgta
ttttctaatgatattgatagcaatgaatatactgaaaaagaaattatagaagcgtttcat
tctatagaaaaagatctagtaagatcaaatatccttgaaggtaagccaagaattgatggc
agatgtacggaaacaatccgtccaataaacgtaaaaacgggcattttaccaggtgttcat
ggttctgctttgtttactcgtggggaaactcaagctcttgtagttacaacactaggcagc
gatagggatgcgcaattagttgaaagtttagatggtgttgagaaagccagatatatgctt
cattataatttcccaccgtattgtgttggtgaatgtggtatggttgggatggcaccaaaa
cgtcgtgaaattggtcacgctaatcttgctaagcgtgctactaatgcagtatttcctaat
gaggaagtttatccatatgttgtaaggattgtatctgaaatattagagtcaaatggttca
agttctatggcaacagtatgcggttcatcgctttcaatgatggatgctggtgttcctata
gctgagcctgtagctggtattgctatgggacttattaaagatggttcaagatatgcagtt
ttatctgatattttaggagatgaggaccatttgggtgatatggattttaaagttgctggt
actaggtatggtgtcacagctttacagatggacattaaaataaaaggtatttcaagagaa
attttagaacaagctttagagcaagcaagagttggtagattacatattttaggtataatg
aatgaggttataagagaacataaagaagatgtttcatctggggctcctcaaattcatata
ttgaatgttaatcctagcaaaataaaagatatcgttggtcgtggaggctctactataaaa
gcaataatagaaagaacgggtgctcaaattgatacaaatgatactggtgaagttaaagtt
tttgcaaaaaataaaagttctcttgacatggcagttaaagaaatagaagctattgtagca
gaggttgaagaaggacaagtttataaaggtaaagttgttaaaatcttagaatctggagtg
tttgttaacctaatgggtgataaagatggttatttatctttccaagatattgaacaaact
ggtattaaatcaaactctataattgaaggtcaaggtcttgaagttatagcgcaaaatata
gatagaaatggtagagttaaactttctctagtagcaaggtag

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