KEGG   Francisella halioticida: CDV26_03980
Entry
CDV26_03980       CDS       T04972                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
fha  Francisella halioticida
Pathway
fha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CDV26_03980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fha03400]
    CDV26_03980
DNA repair and recombination proteins [BR:fha03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CDV26_03980
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CDV26_03980
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_30 Kinesin AAA_22 SWI2_SNF2 Microtub_bd DUF87 eIF3_p135 PHB_depo_C UvrD-helicase
Other DBs
NCBI-ProteinID: ASG67660
Position
718528..720534
AA seq 668 aa
MNKFNLVTKYSPNGDQPKAIESLVAGVNNGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
IVAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYMAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIIATVSAIYGLGDPEQYMQMLLHLKVGEEPGLKKAQTKLIEMQY
SRNDMDFSRGSFRVRGEILDIFPADSEKDAIRVEFFDDEIETISLIDSLTSKKIKLIHRA
TIFPSTHYVASKERKGIVIEQIKEELKERVKYFEEEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRNPGDPPPTLIDYLPKNALVIVDESHATLPQFGGMYKGDLSRKSNL
VNYGFRLLSALDNRPLKFDEFENLLPQTVYVSATPANYELDKSENIVEQIIRPTGLLDPE
LFVRPVAIQVEDALSEINKAIAKGERILITTLTKKMAENLTEYLSEHGANVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMKKAMDETLRRRQLQDEYNKKHNITPKTIIKNIDNMLDSSPE
MQKRAYKNNLRLKVDDVDVSAILGMTEANKVIKALEKRMRVHARDLEFEQATLIRDKISE
IKQKIINL
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgaataagtttaatttggtgacaaagtatagtcctaatggagatcagcctaaagcaata
gaatctttggttgctggagttaataatggcttacaacatcaagttctattaggagttact
ggctctggtaaaacgtatacaatggcaaatgttattcaacaaactcaaaaaccatgtttg
attgttgctcataataaaactctagcagcgcaactatattctgagtttaagcagtatttt
cctgataatgcagttgagtattttgtttcttattatgattattatcagccagaggcatat
atggcagcatcagatacatatatagaaaaagattcatctgtaaatgagcatattgagcaa
atgaggttatctgctactaaagctattttggagcgtaatgatgtaattattatagcgaca
gtttctgctatttatggcttgggtgaccctgagcaatatatgcaaatgcttttgcaccta
aaggtaggtgaagagccaggacttaaaaaagctcagacaaaattgattgaaatgcaatac
tcacgtaatgatatggattttagccggggcagttttcgtgtcagaggtgagatattagat
atttttccagcagattctgagaaagatgcaattagagtagaattttttgatgatgaaata
gagacaattagtctaattgattcactaacatctaaaaaaattaagttgatacatagagca
actatatttccgagtactcactatgttgcatctaaagaacgtaaaggaatagtaatagag
caaataaaagaagagttaaaagaaagagttaaatattttgaagaagagggcaagcttctt
gaagctcagagaatagagcaaagaacaaaatatgatatcgaaatgattcaagaacttggc
tattgtactggtattgagaattattcaagactattgtctggtcgaaatccaggtgatccc
ccacccacattaatagattatttgccaaaaaatgctttagttatagttgatgaatctcat
gcgacattacctcaatttgggggcatgtataaaggtgatttatcgcgtaaatcaaacctt
gtaaactatggttttagattactatctgctttagataataggcctttaaagtttgatgaa
tttgagaatcttttacctcagacagtttatgtatcagcgacaccagcaaattatgagcta
gataagtctgaaaatattgtagaacaaatcattcgcccaacaggattacttgatccagag
ctttttgtacgtccggttgccatacaagtcgaagatgctttgtcagagataaataaagca
attgcgaaaggagaaaggatattaattacaactttaaccaagaaaatggctgaaaatctt
actgaatatttatctgaacacggtgcgaatgttaggtatctacactcagatatagataca
gttgagcgcgttcaaatcattcatgatttgcgccatggagtttttgatgtacttgtaggg
ataaatcttttaagagaaggtttagatatgccagaagttggtgtgctacttatatttgac
gcagataaggaaggctttttacgctctgagaaatcactcatacaaactataggtagggtt
gcaagaaaccaaaatggtcgtgcgattttatatgccgatgtagttaccaaatcaatgaaa
aaagctatggatgagactcttcgccgccgccagcttcaggatgaatataataaaaaacat
aatattacacctaaaactattattaaaaatattgataatatgcttgatagttcaccagag
atgcaaaaaagagcatataaaaataatttgcgtttaaaggttgatgatgtggatgtttcg
gctatactaggtatgacagaggcaaataaggttataaaagctttggaaaaacgcatgcgt
gttcatgcaagagatctagagtttgaacaagcaaccttaattagagacaagatatctgaa
ataaagcaaaaaattattaatttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (22)   

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