KEGG   Francisella hispaniensis FSC454: FSC454_04820
Entry
FSC454_04820      CDS       T04700                                 
Name
(GenBank) DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
fhi  Francisella hispaniensis FSC454
Pathway
fhi03420  Nucleotide excision repair
fhi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fhi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FSC454_04820
   03430 Mismatch repair
    FSC454_04820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fhi03400]
    FSC454_04820
Enzymes [BR:fhi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FSC454_04820
DNA repair and recombination proteins [BR:fhi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FSC454_04820
   MMR (mismatch excision repair)
    Other MMR factors
     FSC454_04820
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 DEAD PhoH AAA_30 AAA_11
Other DBs
NCBI-ProteinID: APD50495
UniProt: A0A153JHR2
Position
1000836..1002902
AA seq 688 aa
MQYTAEQQKIINHDITKHALVSAVAGSGKTQTLIARIEYLVSNQVAPNRILVLMYNKSAQ
LDFATRLKKVLKPEIAKLINVRTMHSLGNSFLQAFAKAGFVKADKILKEYEVDAIIVKLL
KTYQKEFKITKDIDNERVEIFKNYISLLKSDLSLDNSKIKELNSKEKKLLDKIFSQFNQE
CENQKVITYDDMIYLPAKFFEKDKSSVTQASNLYSHIIIDEYQDINQIQQFFLRCLVGQN
TYVMAVGDVDQTIYQWRGSTPYYMLEGFKKDFKDVKQYTLSYTFRYGDLISLMANNIIVN
NKKRHNNLCITYPKLNKATDVSILDSSDKVVLKLKALIHSGVKASDIVILVRKYNSTTIF
ELSCLYHDLAYNVVADKNIFSENLFKAIYGYLMLFNKGYGFSKHTLEQRVEFIKSMLDYP
SLYLKKDLKQKLAIQIASDISQAANFIAALSETVDKAFKQKNILAISSSWRNIFNNTRLR
KAEKAIDFILESLDLEKQISKVSGETHSSKSKLQIIEGMVSFAKGKKNTLIEFIELLYEL
YIRSNQQNQSNPNQIQIMSMHRAKGLEWDYVVVHDATEGGFFGDKNTKVCDDVIEEERRL
FYVAITRVKKHLFIVSSDDITRLSSWYQIRKNTYPRDLKCKNSLRFLYEGNLVECENYLD
KSNCDDNAKKLDNIIFKRYHAKITTEFD
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgcaatacacagctgaacagcaaaaaatcattaatcatgatatcactaagcatgcttta
gtttccgcggtagcaggtagtggtaaaacccaaactttaatagcacgaattgagtatctg
gttagcaatcaagtggcgccaaataggatcttagttttgatgtataataagtcagcccaa
cttgactttgctacacgcctaaaaaaagttctcaagccagaaattgccaagttgataaat
gtgcgtactatgcattccttgggtaacagttttcttcaagcttttgctaaagctggtttt
gtcaaagctgataaaattctcaaggagtatgaagtagatgcaatcatcgttaagctccta
aaaacttatcaaaaagaatttaaaataactaaagatattgataatgaacgagtagaaata
tttaaaaattatatttcattactaaaatcagatttatctttggataatagtaaaataaaa
gagttaaactcaaaagagaaaaagttattagacaaaattttcagccaatttaatcaagaa
tgtgaaaatcaaaaagttataacatatgatgatatgatatatttaccagctaagtttttt
gaaaaagataaatccagtgttactcaagcaagtaatttgtattcgcatataatcattgat
gagtatcaagatataaatcagattcaacaattttttttacggtgtttggttggacaaaat
acttatgttatggcagttggtgatgtcgatcaaactatctaccaatggcgtggctcgact
ccttactatatgttagaaggtttcaaaaaagattttaaagatgtaaagcaatacacactt
tcatatacttttcgttatggtgacctgatatcgcttatggcaaacaatattatcgtaaat
aataaaaagcgacataataacttatgtataacttaccctaaattaaataaagctactgat
gtgagtattttagatagtagtgacaaagtggtattaaaactaaaagcattaatacatagt
ggcgttaaggctagtgacatagtgatacttgtacgtaaatataattcaactacaattttt
gagttaagttgtttgtaccatgatttggcatataatgttgttgctgataaaaatattttt
agtgagaatctttttaaagctatttatggatatttaatgttgtttaacaaaggttatggt
tttagtaaacatactcttgagcaacgtgtagagtttatcaaatctatgttagattatcct
tctttatatctaaaaaaagatcttaagcaaaaattagctatacagattgctagtgatatt
tctcaagctgcaaattttatcgctgctcttagcgaaacggttgataaggcatttaaacaa
aaaaatatcttagcaatatctagtagttggcgtaatatttttaataatacacgcttaaga
aaagctgagaaagcgattgatttcatattagaaagtttagatttagagaaacaaatttct
aaggtttcaggagaaactcactcaagtaaatctaagctacagattattgagggaatggtt
agtttcgctaagggtaaaaaaaatactctgatagagtttattgagcttttatatgagctt
tatattagatcaaatcagcaaaatcaaagtaatcctaatcaaattcaaattatgtcgatg
catcgagctaaagggttagaatgggattatgttgtagttcatgatgctacagaaggagga
ttttttggtgataaaaacaccaaagtttgcgatgatgtaatagaagaagaacgaagacta
ttctatgttgcgattacacgagttaagaaacatttgtttatagtttcatctgatgatata
acacgtttatcatcttggtatcagattagaaaaaatacttatccacgtgatttgaaatgt
aagaatagcttaagatttctatacgaaggaaatttagttgagtgtgagaactatctcgat
aagtctaattgcgacgataatgctaaaaaactcgataatataatctttaaaagatatcac
gctaaaattacaactgagtttgactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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