KEGG   Candidatus Filomicrobium marinum W: BN1229_v1_0068
Entry
BN1229_v1_0068    CDS       T03856                                 
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
fil  Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:fil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fil03009]
    BN1229_v1_0068 (rluD)
Enzymes [BR:fil01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BN1229_v1_0068 (rluD)
Ribosome biogenesis [BR:fil03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BN1229_v1_0068 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: CFW97841
UniProt: A0A0D6J9R5
Position
1:66991..68016
AA seq 341 aa
MKVDEDKTAESDVREFFASAEDVGERIDKWLVGKLPNFSRSRIQALVREGAVWSGGRILS
NPGERIKADEAYRIIVPDAVPEPPRAQPIALNIVYEDAHLIVVDKPAGLVVHPGAGHSSG
TLVNALIAHCGESLSAVGGPERQGIVHRLDKDTSGLLVVAKDDATHQGLAEQFVSHGLDG
RLRRSYIALSWGEPDRNRGQIEANLGRSPQNRTKMAVVAPEEGRHAVTHYEVLRTFDAPS
APKLVSLMRLVLETGRTHQIRVHLAHIRHPVLGDPVYGSGFKASARRLGPAARTALERLG
RQALHAAELAFEHPVTGEQLSFESPLPDDMVRLVECLEAGN
NT seq 1026 nt   +upstreamnt  +downstreamnt
gtgaaggtggatgaagacaagacggcggagagcgacgtgcgcgagtttttcgcttcagcc
gaagacgtcggtgagcggatcgataagtggcttgtggggaagcttccaaacttcagccgc
tcgcgtatccaggcgctcgtgcgggagggagcggtttggtccggtggacggattctcagc
aatcccggtgagcgtatcaaagccgacgaggcatatagaattatagtgcctgacgctgtg
ccggaacccccgcgtgctcagcccattgcgctgaatatcgtctatgaagacgcgcatctc
attgtcgtagacaaaccggccggactcgttgtgcatcctggagccggacattcctccggg
acgctggttaatgcgcttatcgcgcattgcggcgagagtctctctgctgttggcgggcca
gaacggcaagggatcgtgcatcggctcgacaaagatacttcagggcttttggtggtcgca
aaagacgatgcaactcaccaaggtctggctgagcagttcgtgtctcatggacttgatggg
cggttacgccgttcctatatcgcgttgtcctggggagagcccgatcgcaatcgggggcaa
atcgaggcgaatctgggccgcagtccgcaaaaccgcacaaaaatggctgttgtcgcacct
gaggaaggtcggcacgcggtgacccattatgaggttctgcggacgttcgatgctccttct
gcgccgaaactcgtttcgctgatgcgtttggtgctcgaaacaggccgcacacatcaaatt
cgcgtgcatttggcgcatatcaggcatccagttctgggggatccggtttatggtagtggc
ttcaaagcgagcgcgcgtcggctagggccagcagcgcgaacggcactcgagaggttgggg
cgacaagctctacacgccgcagaattggcgtttgaacacccggttaccggcgaacagctc
tcatttgagagccctttgcccgacgatatggtccggcttgttgaatgcctggaagccgga
aactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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