KEGG   Candidatus Filomicrobium marinum W: BN1229_v1_3989
Entry
BN1229_v1_3989    CDS       T03856                                 
Symbol
ddlB
Name
(GenBank) D-alanine:D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
fil  Candidatus Filomicrobium marinum W
Pathway
fil00470  D-Amino acid metabolism
fil00550  Peptidoglycan biosynthesis
fil01100  Metabolic pathways
fil01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:fil00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BN1229_v1_3989 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BN1229_v1_3989 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    BN1229_v1_3989 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:fil01011]
    BN1229_v1_3989 (ddlB)
Enzymes [BR:fil01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     BN1229_v1_3989 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:fil01011]
 Precursor biosynthesis
  Amino acid ligase
   BN1229_v1_3989 (ddlB)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N GARS_A ATP-grasp_4 CPSase_L_D2
Other DBs
NCBI-ProteinID: CFX63322
UniProt: A0A0D6JKQ4
Position
1:3880336..3881283
AA seq 315 aa
MIGPAPARTFEHIAVLMGGWSAEREVSLNSGAAVADALEGEGYRVTRIDVTRNIAQRLVE
VKPQACFNALHGKFGEDGCVQGVLECLEIPYTHSGVLSSALAMHKERAKAVMKPAGIPVA
NAVIVTRRQAMAEHALPPPYVVKPLTEGSSVGVVIVQKADEPPPVRIGEDGDLDDVVMVE
RYVAGRELTCAVIGDFVTDVTDILPAEGLQFYDYQAKYGAGGSRHQVPAKLSPDIYQSIR
KCTLAAHQALGCRGVSRADFRFDDTPGGTGELVCLEVNTQPGMTTTSLVPELAAHAGWSF
GELVRWIIEDASCNR
NT seq 948 nt   +upstreamnt  +downstreamnt
atgatcgggccagcgccagcgcgtacgtttgagcatattgccgttctcatgggcggatgg
tcggccgaacgggaggtcagccttaattcgggtgcagcggtggctgatgcgttggagggc
gaaggctaccgggtcacacggatcgatgtcacgcgtaacatcgctcagcggctcgtcgag
gtgaagccgcaagcttgtttcaacgcgcttcacggaaagttcggtgaagacggctgcgtg
caaggcgttcttgaatgccttgaaattccttatactcattcgggcgttctttcctcggca
ctcgctatgcacaaagagcgggccaaagccgtgatgaagccggccggcatccctgttgcg
aacgcagtcatcgtcacacgacggcaagccatggcagaacatgcgctaccgccgccatac
gtggtcaagccgctgacggagggctccagcgtcggcgtcgttatcgtgcagaaggccgac
gaaccgcctcccgttcggatcggtgaggatggcgacctggacgacgtggtgatggtcgag
cgttatgtggccggtcgggaactgacgtgtgcggtcattggtgatttcgtgaccgacgtc
accgacattttgcctgccgaaggtctccaattttatgattatcaggcaaaatacggggct
ggcgggtctcgccatcaagttcctgcaaagctttcaccagatatttaccaatctatacgg
aaatgcacattggcggcgcatcaggcgctggggtgccgcggcgtgagcagagctgatttc
cgctttgacgatacgcccggcggtaccggtgaactggtgtgcctcgaggttaacacccag
ccaggtatgacgacgacttctttggtgccggagctcgcggcccacgcaggatggtcgttc
ggtgagttggttcgctggattatcgaggacgcaagttgcaacaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system