KEGG   Candidatus Filomicrobium marinum W: BN1229_v1_4010
Entry
BN1229_v1_4010    CDS       T03856                                 
Name
(GenBank) ATPase AAA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
fil  Candidatus Filomicrobium marinum W
Pathway
fil03420  Nucleotide excision repair
fil03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BN1229_v1_4010
   03430 Mismatch repair
    BN1229_v1_4010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fil03400]
    BN1229_v1_4010
Enzymes [BR:fil01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BN1229_v1_4010
DNA repair and recombination proteins [BR:fil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BN1229_v1_4010
   MMR (mismatch excision repair)
    Other MMR factors
     BN1229_v1_4010
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 PcrA_UvrD_tudor DEAD AAA_11 ResIII DUF3553 Cytomega_TRL10
Other DBs
NCBI-ProteinID: CFX63802
UniProt: A0A0D6JKS1
Position
1:complement(3904710..3907151)
AA seq 813 aa
MPIEQQDDPPFDLPPNTESGAGTPGQAAPAHAQGSISQRALAKRPMSSSAAPYLDALNPE
QRAAVEALEGPVLVLAGAGTGKTRVLTTRIAHILETGRAYPSQILAVTFTNKAAREMKER
VERFVGSSVEGMPWLGTFHSIGVKILRRHAELVGLKQGFTILDVDDQLRLMKQVIEAEGL
DKDRWPARQLAAYIDRWKNRGLTPEKVPAGEAHAFAGGKGRELYAAYQRRLKELNAADFG
DLLLESLRLFMENPDILAQYHNRFRYILVDEYQDTNVAQYLWLRLLAQGSEKPNICCVGD
DDQSIYGWRGAEVDNILRFEQDFPGATVIRLERNYRSTAHILATASHLITANENRLGKTL
FTDGAAGNKVTVTGLWDDVEEARTVTDNIEALSKQGHQLNEIAILVRASFQMRVLEDRFV
TTGLPYRVIGGPRFYERAEIKDAIAYLEVTANPANDLKFERIINVPKRGLGDTSVKRVRE
LARASEIPLFAAAQSIIETEELSGKARRSLSDLVGQFERWRANAATMPHTELAKLILDES
GYTQMWQADKSPQAQSRLENLKELVHFMDDFDTLQGFLEHVSLVMDIDNASDGDRVSIMT
LHAAKGLEFDTVFLTGWEEGVFPSQRTLDESGQAGLEEERRLAYVGITRAKVSAHISFTQ
NRRNRGLYQSAIPSRFVDELPEAHVEVVEAKTPFGGAYQNFGGRFGGNPYGASRFDEAPA
AFQSSYATPGWQRAQKQWQSDSTTPPRRRAAPRTIEGELVASSTSESSFEMGERVFHQKF
GYGRISEIDGNKLTIDFEKSGRKRVVDSFVERH
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgccgatcgaacagcaagacgacccaccctttgacctcccgccgaacacagagtccggc
gcaggaacacctgggcaggccgcacctgcgcacgcgcaaggctccatatcgcaacgtgcg
cttgcaaaacgcccgatgtcatcatcggcagcgccatacctcgatgcgctcaatccggaa
caacgtgctgcggtagaagctcttgagggacccgtcctcgtgcttgcgggggccggcacc
ggcaaaacacgtgtgctcaccacccgtatcgcccacatcctcgaaaccggtcgcgcctac
ccatcccaaatcctcgccgtaacatttacgaacaaagcagcgcgggagatgaaagagcgc
gtcgagcgctttgttggcagcagcgtcgaaggcatgccatggctgggcaccttccactcg
ataggcgtgaaaatcctgcgccgccacgccgaactcgtcggtttgaagcaaggcttcacg
atcctggacgtcgatgatcagctccgcctgatgaagcaggtgatcgaagctgaaggcttg
gacaaggatcgctggccggcccgtcagctcgccgcctacatagaccgctggaaaaaccgc
ggcctcacgccagaaaaggtgcccgccggcgaagctcacgcgtttgcaggcggcaaaggc
cgcgagctttacgccgcctaccaacgccgcttgaaggaattgaacgccgccgattttgga
gacctcctattggaaagcctcaggcttttcatggagaacccggatattctggcgcagtat
cacaaccgtttccgctacatcctcgtcgatgaataccaggacaccaacgtcgcccaatat
ctgtggctgcgtttgttggcgcagggctctgaaaaaccgaacatctgctgtgtcggcgat
gacgatcaatcgatttatggctggcgcggagccgaggtcgacaacatcctgcggtttgaa
caggacttccccggggcaaccgtcatccggctagaacggaattaccgctcgaccgcgcat
atcctggcaaccgcctcacatctcatcaccgccaacgagaaccgcctcggcaagacgctc
ttcaccgatggcgcagccggcaacaaagtcaccgtgaccggactatgggatgatgtagaa
gaagcccgcaccgttaccgacaacatcgaagccctgagcaagcaagggcaccagctgaac
gagatcgcgatcctcgtacgcgcatctttccagatgcgtgtactggaagaccgcttcgtc
acgacaggtttgccctaccgtgtcatcggcggcccacggttttatgagcgagccgaaatc
aaggatgcaatcgcctacctggaagtcacggccaatccggccaacgatcttaagttcgag
cgcatcatcaacgtgcccaagcgcggcctgggggacacatccgtcaaacgcgttcgcgaa
ttggcacgcgcaagcgagatcccgcttttcgccgcagcgcaatccatcatcgaaaccgaa
gagctgtccggcaaagcccgacgctcattgagcgaccttgtcgggcagttcgagcgctgg
cgagcaaacgccgcaaccatgcctcatacggagctggccaaactgatcctggacgagtcg
ggctacacccagatgtggcaggcggacaaaagcccgcaagcccagtcccgcttggaaaac
ctcaaggaactcgtacacttcatggatgatttcgatactcttcagggattccttgaacac
gtgtccttggtgatggatatcgacaacgcgagcgacggcgatcgcgtctccatcatgacg
ctgcatgccgccaagggcctggagtttgataccgtctttctaactggctgggaggaaggc
gtattcccgagccagcgtacgctcgatgaaagcggacaggccggactggaggaagagcgt
cgtctggcttatgtcggcatcacccgggccaaggtcagtgcacatatctccttcactcag
aaccggcgcaatcgtggtctctatcaatccgcgatcccctcacgcttcgtcgacgaactc
ccggaagctcacgtcgaggttgtcgaagctaaaacaccgttcggtggtgcgtatcagaat
tttggtgggcgcttcggaggcaacccttacggcgccagccgcttcgatgaggccccagcg
gcattccaatcgagctacgcgacgccgggctggcagcgcgcgcaaaaacagtggcaatca
gattcgacaacgcccccacgccgtcgcgcagccccacgcacgattgaaggcgaactcgtc
gcatcctcaacgagcgagtcctcatttgaaatgggagagcgggttttccatcaaaagttt
ggctatggccggatctcggaaatcgacggcaataagctcaccattgattttgagaaatcg
ggacgcaagcgcgtcgtcgactctttcgtcgagcgccactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (53)   

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