KEGG T00508: Fjoh

Flavobacterium johnsoniae: Fjoh_0779

Entry

Fjoh_0779 CDS T00508

Definition

glycoside hydrolase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

fjo Flavobacterium johnsoniae

Pathway

fjo00052	Galactose metabolism
fjo00511	Other glycan degradation
fjo00600	Sphingolipid metabolism
fjo01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:fjo00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:fjo00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:fjo00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_N Glyco_hydro_2_C Glyco_hydro_2 BetaGal_dom4_5 Cellulase-like

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(865012..867495)

AA seq 827 aa
MLQLTSYKKLGLLFAGFLLLTACKSSTDQKFSNRKVSFNADWSFHLNDSIADKDTIGAGT
KWRTLDVPHDWSIEGKFDEKSPGGYGGGSLNGGLGWYKKTFKVAAEDSTKVTSITFDGVY
KNSEVWVNGHYLGKRPNGYIGFQYEITPYLNYGDKNNEIIVKVDNSKQPNSRWYSGSGIF
RNVWLETTDKLHVGQWGTYITTPKVTAEKASVSIETTIKNQYKEGKKATVTTTIFKEDKK
VTSVTQDITINASENQTLNQSAEVENPILWSDENPELYTAVTEISLDDKIIDQYKTTFGI
RDFKFDLNKGFILNGKQVKIKGVCMHHDLGPLGSAINTRAIERQLEILKEMGVNGIRTSH
NPPAPELLELCDKMGFIVMDEAFDMWKQTKTKYDYGNDWDKWHKQDLIDQLLRDRNHASI
FMWSIGNEIPEQWSEKGVEIAKELAAITRQYDKTRPLTAGMNPPVNMNIDAVTLQFEKKD
VSINPLAGSGVLDLIGYNYAHQTFEHHLENFPKTPFIATETTSGLQTRGYYDAVSDTIKK
WPVRWDLKFTEGNPGNTVSAYDQVQTPWGSTHEATWKIIKKHDFLAGMYVWTGFDYIGEP
TPYEWPSVSSYFGIVDLAGFPKDVYYMYQSEWTDKTVLHIFPHWNWKAGQTVDVWAYYNK
ADEVELFVNGKSVGKRSKKGDDLHVMWRIPFEAGTLKAVSRKDGKVVLEKEIKTAGNPSQ
LKLTADRSTIKADKNDLSFITVDILDDKGTIAPNANNEINFSLKGNGKIVGVCSGDPVSH
ESYKGNKHTALAGKCLVIVQSGDKSGRLELTAKANGLKQSTIVITTE

NT seq 2484 nt +upstreamnt +downstreamnt
atgttgcagctaacttcatataaaaaactaggattactatttgcaggctttcttttattg
acagcatgcaagtcatcaacagatcaaaaatttagtaaccgaaaagtttcttttaatgca
gattggagtttccaccttaacgacagtattgcagataaagatactattggagcgggaaca
aaatggagaactttagacgttccgcatgattggagtatcgaaggaaaatttgatgaaaaa
agtcctggcggttatggcggaggatcgcttaacggaggtttgggctggtacaaaaaaaca
tttaaagtagctgcagaagacagcacaaaagtaacttcaatcacttttgacggtgtttac
aaaaacagtgaagtctgggtaaacggacattatttaggaaaacgtccaaacggatatatt
ggttttcaatatgaaattacgccgtacttaaattacggagacaaaaacaacgaaataatt
gttaaggttgacaattcaaaacaacctaattcacgctggtattcgggttcaggaattttt
agaaatgtttggcttgagaccacagataaacttcatgtaggacaatggggaacgtatatt
acaactccaaaagttacagccgaaaaagcttcagtaagtattgaaaccacaataaaaaat
caatacaaagaaggtaaaaaagcaacggtaactaccaccatttttaaagaagataaaaaa
gtaacatcagttactcaagatataacaatcaacgccagcgaaaatcaaacgctgaatcaa
tcggcggaagttgaaaatccgattttatggtcagatgaaaaccctgaattgtacacagca
gttaccgaaatttcacttgacgataaaatcattgatcaatataaaaccactttcggaatt
agagattttaaattcgatttgaacaaaggttttattttgaatggaaaacaagtcaaaata
aaaggtgtttgtatgcaccacgatttaggaccattaggttctgcgatcaacacgcgtgca
atcgaacgtcagttagaaattttgaaagaaatgggcgtaaacggaatcagaacttctcat
aatccgcctgctccagagcttttagaactctgcgataaaatgggtttcattgttatggat
gaagcttttgatatgtggaaacagaccaaaaccaaatacgattacggaaacgattgggac
aaatggcacaaacaagatttaatcgatcaactgcttcgcgaccgaaatcatgccagtatt
tttatgtggagtattggaaatgaaattccggaacaatggagtgaaaaaggtgttgaaatt
gcgaaagaattggccgcaattacacgtcaatatgacaaaacacgaccgttgactgcagga
atgaatccgccagtaaacatgaatattgatgccgtgactttacaatttgagaaaaaggat
gtttcgattaatccgcttgctggatctggagttttagatttaattggatacaattatgcg
catcaaacttttgaacatcatttggaaaactttccaaaaacaccttttatcgcaactgaa
actacttcaggtttacagacaagaggatattacgatgccgtttcagatactatcaaaaaa
tggccggtaagatgggatcttaaatttacagaaggaaatcctggaaataccgtttcggct
tacgaccaagtgcaaacgccttggggatctacacacgaagcgacttggaaaatcattaaa
aaacacgatttcttggcaggaatgtatgtttggacaggcttcgattatatcggagaacca
actccttatgaatggccgtctgttagttcctatttcggaattgtcgatttagcaggtttt
ccgaaagacgtgtattatatgtaccaaagcgaatggacagataaaaccgttttgcacatt
ttcccacattggaactggaaagccggacaaactgttgatgtttgggcatactacaataaa
gccgatgaggtggaactttttgtaaacggaaaatcagttggaaaaagaagtaaaaaagga
gacgatttacatgtgatgtggagaattccttttgaagctggaactctaaaagcagtttct
cgtaaagacggaaaagtggttttagaaaaagaaatcaaaacagctggaaatccttctcaa
ttaaaattaactgcggatagaagcactataaaagcagacaaaaacgatttgtcatttatc
acagttgatattttagatgataaaggaacgattgcaccaaatgcgaataacgaaattaat
ttctctttaaaaggaaatggaaaaattgtaggcgtttgcagcggagacccagtaagtcac
gagtcttacaaaggaaataaacataccgctttggctggaaaatgtttggttattgtacaa
tctggagataaatcaggaagattggaattaaccgcaaaagcaaacggattgaaacaatca
acaattgtaattactactgaatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-FJO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

Download RDF

DBGET integrated database retrieval system