KEGG T00508: Fjoh

Flavobacterium johnsoniae: Fjoh_1256

Entry

Fjoh_1256 CDS T00508

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

fjo Flavobacterium johnsoniae

Pathway

fjo00020	Citrate cycle (TCA cycle)
fjo00310	Lysine degradation
fjo00380	Tryptophan metabolism
fjo01100	Metabolic pathways
fjo01110	Biosynthesis of secondary metabolites
fjo01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:fjo00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:fjo00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:fjo00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1428820..1431594)

AA seq 924 aa
MDRFSFLNAAHTEFFAQLYDQYLVNPDSVEPSWRSFFQGFDFGQTTYNDENPVQTIVEYV
TSPNTDYSQVSDKLQKEFNVLKLIDGYRTRGHLFTKTNPVRDRRQSSPTLDIENFGLSTA
DLSTVFDAAQTIGMTPSSLEAIVNRLKAIYCQHIGIEYMYIRNPGVVKWIQDKLAVNVNQ
PNFSTEEKKTILNKLNEAVSFENFLHTKYVGQKRFSLEGGESIIPALDALIEQAAEKGVE
QFVMGMAHRGRLNVLANIFGKSTQDIFGEFDGKDYDQEYFDGDVKYHLGLTADKKTRSGK
SININLAPNPSHLETVGAVIEGITRAKQDKYYNDDFSKVLPIAVHGDAAIAGQGILYEII
QMAQLDGYKTGGTIHIVINNQVGFTTNYLDARSSTYCTDVAKVTLSPVLHVNADDAEAVV
HAVSFALDYRMQFGRDVFIDLLGYRKYGHNEGDEPRFTQPVLYKIIAKHKNPRDIYAEKL
LSDGVIDASYVNGLEKQYKSQLEENLEASRKKDLTIITPFMKNEWEGFVQVTDTQMLQKV
DTTFAKEGLDSIIKTISTLPEDKKFINKITKIVTDRKVGYDNNTLDWGTAEALAYGSLLT
EGFDVRISGQDVERGTFSHRHAVVKVEDSEEEVILLDAIENKKGKFGVFNSLLSEYGVLG
FDYGYALANPKALTIWEAQFGDFSNGAQIMIDQYISCGEDKWNNQNGIVLLLPHGYEGQG
AEHSSARMERYLQLCARHNMYVADCTTPANFFHLLRRQMKTNFRKPLVVFSPKSLLRDPR
CVSTVEELATGSFQETIDDTTVNKKDVKTLVFCTGKFYYDIVAERENNGRKDVAVVRIEQ
LFPFPVEQIKEIIAKYPNADDYVWAQEEPKNMGAYSFMLMNFDLVKWRLASLKAYSAPAS
GSYTRAKRRHADAIRMVFDKNLFR

NT seq 2775 nt +upstreamnt +downstreamnt
atggataggttttcatttttaaatgcagcgcataccgagttttttgcacaattatacgat
caatatttagttaacccagacagcgtagagcctagctggagaagtttctttcaaggtttt
gactttggacaaactacttataatgacgaaaatccagtgcagaccattgttgagtatgtg
actagcccaaacacagattacagtcaggtttcagacaaactgcaaaaagaatttaacgtt
ctaaaattaatcgatggttaccgtacgcgcgggcacttgtttacaaaaacaaacccagtt
cgcgatcgcaggcagtcttctccaactttagatatcgaaaactttggtttatcaacagct
gacctttcaactgtttttgatgctgcacagacaattggaatgacaccttcttctttagaa
gctatcgtaaatcgtcttaaagctatttactgccagcatattggaattgaatatatgtat
atcagaaatcctggtgttgtaaaatggattcaggataaattagctgtaaatgttaatcag
cctaatttctctacagaagaaaagaaaacaatcttaaataaattaaacgaagctgtttct
tttgaaaacttccttcatactaaatatgttggacaaaaacgtttctcattagaaggcggg
gaatctatcatcccggctcttgacgctttgatcgagcaggctgcagaaaaaggtgttgaa
caattcgtaatgggaatggctcaccgtggtcgtttgaacgttttagcaaacatcttcgga
aaatctactcaggatatctttggtgagtttgatggaaaagattacgatcaggaatatttt
gacggtgacgtaaaataccacttaggtcttacggctgacaaaaaaacaagatctggaaaa
agcatcaacatcaatttagcaccaaacccttctcacttagaaacagttggagctgtaatt
gaaggtatcacaagagcaaaacaagataaatattacaatgacgatttctctaaagtatta
ccaatcgccgttcacggagatgctgcaattgcaggtcagggtattctttacgaaatcatt
caaatggctcaattagacggttacaaaaccggaggaacaatccatattgtaatcaacaac
caggttggttttacaactaactacttagacgctcgttcttctacttactgtacagacgtt
gctaaagtaactttatcgccggtattacacgtaaatgctgatgatgctgaagctgttgta
cacgctgtatcttttgcattagactacagaatgcagtttggacgtgacgtatttatcgat
ttattaggatatagaaaatacggtcacaacgaaggtgatgagcctcgttttacacagccc
gttttatataaaatcattgctaaacacaaaaacccaagagacatctacgcagagaaatta
ttatctgacggtgtaatcgatgcttcttatgtaaacggtttagaaaaacaatacaaatct
caattagaagaaaatttagaagcttctcgtaaaaaagatttgactatcattacgccattc
atgaaaaacgaatgggaaggatttgttcaggtaactgatacacaaatgcttcaaaaagtt
gatactacttttgctaaagaaggtttagattctatcatcaaaaccatctctactttacca
gaagacaaaaaattcattaacaagataactaaaattgttacggatagaaaagttggatac
gacaacaatactcttgattggggaactgcagaagcacttgcttacggatctcttttaaca
gaaggatttgatgttcgtatttctggtcaggatgttgagcgtggtacattctctcaccgt
catgctgttgttaaagtagaagactcagaagaagaagtaattctattagatgcaattgaa
aacaaaaaaggaaaattcggcgtattcaattcacttttatctgaatatggtgttctaggt
tttgattatggatatgcattagcaaacccaaaagccttaacaatctgggaagcacagttt
ggagatttctctaacggagctcaaatcatgattgaccagtatatttcatgtggagaagac
aaatggaacaaccaaaacggtattgttttattattacctcacggatatgaaggacaaggt
gctgagcactcttctgcaagaatggagcgttatttacaactttgcgcaagacataatatg
tatgttgcagattgtacaacaccggctaacttcttccacttattgagaagacaaatgaaa
acgaacttccgtaaaccattggtagttttctctccaaaaagtttacttcgtgatccaaga
tgtgtatcaactgttgaagaattagcaactggaagtttccaggaaactatcgacgatact
acagtaaacaaaaaagatgttaaaactttagttttctgtacaggtaaattctactatgat
attgtggcagaaagagaaaacaacggaagaaaagacgttgcagttgttcgtatcgagcaa
ttattccctttcccagttgagcagatcaaagaaatcattgcaaaatatccaaatgcagat
gattatgtttgggcacaggaagagcctaaaaacatgggagcctacagctttatgttaatg
aactttgaccttgtaaaatggagattagcttcattaaaagcatactctgctcctgcatca
ggaagttacacacgtgcaaaacgtcgtcacgcagatgcaattagaatggtattcgataaa
aatttattcagataa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-FJO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

Download RDF

DBGET integrated database retrieval system