KEGG   Flavisolibacter tropicus: SY85_16285
Entry
SY85_16285        CDS       T04392                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
fla  Flavisolibacter tropicus
Pathway
fla03420  Nucleotide excision repair
fla03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SY85_16285
   03430 Mismatch repair
    SY85_16285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fla03400]
    SY85_16285
Enzymes [BR:fla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SY85_16285
DNA repair and recombination proteins [BR:fla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SY85_16285
   MMR (mismatch excision repair)
    Other MMR factors
     SY85_16285
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PcrA_UvrD_tudor AAA_12 ResIII AAA_11 DUF3553
Other DBs
NCBI-ProteinID: ANE51815
UniProt: A0A172TXI9
Position
complement(3856734..3859052)
AA seq 772 aa
MQDYLKGLNERQRDAVTSTEGPLMIVAGAGSGKTKVLTTRIAHLMAKGVDAFNILSLTFT
NKAAAEMKERVEHILANREARNLYIGTFHSVFARILRAEAHRIGYPNSFTIYDTDDAKSV
VKTVTQELNLDVQHYKPNAVYNRISGAKNGLVTAGEYKNDYHIQQEDMRANRPMIGHIYE
AYQKRCFKNGAMDFDDLLFKFYELLKTTPEVLHKYQHKFKYIMIDEYQDTNPAQYEIIKL
LAAAHENVCVVGDDAQSIYAFRGATIQNILQFQQDYTDAKVIKLEQNYRSTQSILTVANE
IIKNNKGQIPKTLFTENAAGEKIRLVRTMSDNEEGKFIADAILEQKLRNHFKNKEFALLY
RTNAQSRAFEESLRRHNIPYTIFGGISFYQRKEIKDFIAYLRLVVNPKDEEALKRIINYP
VRGIGKTSVDRAVLAANEGNISMWEVLEAAPMFGFKAGTLQAIEEFVLMIRSFKSMLETK
NAYDIAFHVGKQTGFVKELFNDKSTEGVQRYENVQELLNSIKEFTETPMSEESGEVGDKG
LAAYLQQIVLLTDADQKDPDADTVKLMTIHAAKGLEFPVVFVGGLEEGLFPNAMSLNTRE
ELEEERRLFYVAVTRAKTRLYLTYANTRYRFGQLIQSDSSRFITEIPETHIDVSFAGGGV
KNQKSSSWGQGNAFERMQRGFGGNSSAPEKTAVSTLVSNNKPKEVAHTASANFVPSDPAT
LKEGMRVEHQKFGFGEVLKLEGSSHNPVATIKFEQNGEKKIMLNYAKLMIVS
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgcaagattacctgaagggactgaacgagcgtcagcgcgacgccgtgaccagcacagaa
ggcccgctgatgattgttgccggcgcgggcagtggaaaaaccaaagtacttaccacccgg
attgctcacttgatggccaagggcgtagatgcctttaatatattgtcgctcacctttacc
aataaggcggctgccgaaatgaaagagcgggtagaacacatcctggccaaccgcgaggcc
cgcaacctttatattggcacatttcactccgtgtttgcccgtattctgcgcgcagaagca
caccgcattggttaccccaactcgtttaccatatacgataccgacgatgccaagagcgtg
gtaaaaacggtaacccaggaactgaacctggacgtacagcactataaacccaacgctgtt
tataatcgtatttccggcgccaagaacggcctggtaacggcaggggaatacaaaaacgac
taccacattcagcaggaggacatgcgggccaaccgccccatgatcggccatatatatgag
gcctaccagaagcgctgctttaaaaacggcgctatggactttgacgacctgttgttcaag
ttctatgagttgttgaaaaccactccggaagtattgcacaagtaccagcacaagttcaag
tatataatgatcgatgagtaccaggatactaacccggcccagtacgagatcattaaatta
ttagccgccgcacatgaaaatgtgtgcgtggtgggtgacgatgcccagagtatctatgcc
ttccgtggcgctaccattcaaaacatcctgcagtttcagcaggactacactgatgccaag
gtgatcaagctggaacagaactaccgcagtacccaaagcattctgacggtggccaacgag
attattaagaacaataagggacagatccctaaaaccctctttaccgaaaacgctgctggt
gaaaagatccgcctggtgcgcaccatgagcgataatgaagagggtaagttcattgccgat
gccatcctggagcagaagctacgcaaccattttaagaacaaagagttcgctctgctttac
agaaccaacgcccagagccgggcctttgaagaaagcctgcgtcgccacaatattccctac
accatttttggcggtatctctttctatcaacgcaaggagatcaaggactttattgcctac
ctgcgactggtggtgaaccctaaggatgaagaagcactgaagcgtattatcaactacccg
gtacgtggtattggtaaaacctcggtagaccgcgcggtgctggctgccaacgagggtaat
atctctatgtgggaagtgctggaggccgctcccatgtttggttttaaagccggcacgcta
caggccattgaagaatttgtgctgatgatccgcagctttaaaagcatgctggaaacaaag
aacgcctacgatattgctttccatgtgggtaagcaaaccggttttgtaaaagagctgttt
aacgataagagtacggaaggtgtacaacgctacgagaacgtacaggaattgctgaactct
attaaagagtttaccgaaacgccaatgagtgaagagagcggtgaggtgggtgataaaggc
ctggcggcttacctgcagcagattgtactgcttaccgatgctgaccagaaagatcctgac
gcggatacggtaaaactcatgaccatccacgctgccaaaggactagagttcccggtggtg
tttgtaggtggtttggaagaagggctgttccccaacgccatgagccttaacacgcgcgag
gagttggaagaagaacgccgcctgttctatgtggccgttacgcgcgctaaaacacgcctg
tatctaacgtacgctaatacgcgctaccgctttggccaactgattcaaagcgacagtagc
cgctttattaccgagattcctgaaacgcatattgatgtaagctttgctggcggtggtgta
aagaaccagaaatcatccagctggggtcagggcaatgcctttgagcgcatgcagcgtggc
tttggcggcaatagtagcgctcctgaaaaaacagcggtatctactttggtgagcaacaac
aagcccaaagaagtagcccataccgcatcagccaattttgttcccagcgatcctgctaca
ttgaaagaaggcatgcgcgtagagcatcagaagtttggctttggcgaagtgttgaagctg
gaaggctccagccacaacccggtagctactattaagtttgagcaaaacggtgaaaagaag
atcatgctgaattatgctaagctgatgattgttagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system