KEGG   Finegoldia magna: FMG_1117
Entry
FMG_1117          CDS       T00661                                 
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
fma  Finegoldia magna
Pathway
fma03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FMG_1117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fma03021]
    FMG_1117
   03400 DNA repair and recombination proteins [BR:fma03400]
    FMG_1117
Enzymes [BR:fma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FMG_1117
Transcription machinery [BR:fma03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FMG_1117
DNA repair and recombination proteins [BR:fma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FMG_1117
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C RPOC_hybrid NusG_add
Other DBs
NCBI-ProteinID: BAG08535
UniProt: B0S2E5
Position
complement(1215044..1218706)
AA seq 1220 aa
MILMNSAAMIDYKKGEGSLVQKNTFEAMKIGLASPDKIRQWSWGEVKKPETINYRTLKPE
KEGLFCEKIFGPTKDYECNCGKYKRIRYKGIVCEKCGVEVTKSKVRRERMGHIELATPVS
HIWYFKGIPSRMGLLLDMSPRALEKVLYFASFVVIDPGKTDLYEKQLLTEQEYEEYCDKY
EEDVDFRAKMGAEAIKELLQKIDLQEEYKNLTETFEGSTGQKKVRILRRLEVVEAFIESK
NDPSWMIMDVIPVIPPDIRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDIGSPEII
VRNEKRMLQEAVDALIDNGRRGKPVTGPGNRPLKSLSDMLKGKSGRFRQNLLGKRVDYSG
RSVIVIGPNLKFYQCGLPKKMALELFKPFVIRELVKREISHNVKNAKKLVERENDKVWDV
LEDIIVDHPVLLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHLP
LSPEAQAEARLLMLSTNNILAPKDGKPITTPSQDMVLGSFYMTTRKEGQKGEGLIFKDID
EMMLAYAMHYVTLQTIVKVRRNSVNNDGTSKIVESTVGRFIFNEGIPQDLGMVNRNEDPY
SLEVDLQVDKKMLSKIIDLTFRRYGNIRTAELLDYIKSMGYKYSTIGALTISMGDITIPD
SKKGIIEQAEQRIDMVQDIYLQGDITNEERYKKVIEIWEQCIKDVTRALMTNLPADNNLN
IMAVSGARGSENQIRQLGGMRGLMSDTAGNTIEIPITSNFREGLSVQEFFISTHGSRKGL
SDTALRTADSGYLTRRLVDVSQDVIITEDDCGTDEYIVAKEIKDGNRQVEDLKSRIIGRY
AFEDILDLDTGEIIVHKNDMINEAIAERIESKGIKEVKVRSVLGCKMKHGVCAKCYGRNL
ATGKPVNIGEAVGIIAAQSIGEPGTQLTMRTFHSGGIAGVGITSGLPRVEELFEARKPKG
LAYITEIEGTVKIQENKKRNDVIVTSEDGEEQVYQIPYGAHIRVNEGDHVEKGEPLTEGS
INPQDILRVNGAEGVRDYIIREVQKVYRLQGVDIDDKHIEIIIRQMMSKIKVEESGDSGF
LSGSVVDARDFKMTNEQLIKEGKTPATGTHSLMGITKASLATESFLSAASFQETTRVLTE
TSIKGKVDHLIGLKENVIIGKLIPAGTGIAKYDRIEVDYDGKAEDDMIEAEKAQASNDSE
EAEESTIISGNYESLQDEDK
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgattctaatgaattcggcagcgatgatagactataagaaaggagagggctccttggta
caaaaaaatacttttgaagctatgaaaattggtttggcttcaccagacaaaattagacaa
tggtcttggggagaagttaaaaaaccagaaactataaattatagaacattaaaacctgaa
aaagaaggtttattctgtgaaaaaatatttggacctacaaaagattacgaatgtaattgt
ggtaagtacaaaagaataagatacaagggcattgtatgcgaaaaatgtggtgtagaagtt
acaaaatcaaaagttagacgtgaaagaatgggccacattgaacttgcaactcctgtaagt
catatttggtatttcaaaggaattccatcacgtatgggattgttattggatatgagtcct
agagcacttgaaaaagtactttattttgcatcatttgtagttatagatccaggtaagact
gatttatatgaaaaacaattattaactgaacaagaatacgaagaatattgtgacaagtac
gaagaagatgttgatttcagagccaaaatgggagctgaagcaataaaagaacttcttcaa
aagatagacttacaagaagaatacaaaaacttaactgaaacttttgaaggatcaactgga
caaaagaaagttagaattttaagaagacttgaagttgttgaagcatttatcgaatcaaaa
aatgatccatcatggatgattatggatgtaattccagtaattccaccagatatcagacca
atggtacaacttgaaggcggaagatttgctacaagtgatttgaatgatttatacagaaga
gttatcaacagaaacaatcgtctaaaaagattattggatattggatctcctgaaatcatt
gtaagaaacgaaaaaagaatgcttcaagaagcagtagatgctcttattgataatggtaga
cgtggaaaacctgtaacaggacctggcaacagaccattgaagagtttgtcagatatgtta
aaaggtaaatctggtcgtttcagacaaaacttgttaggtaagagagttgactattctggt
cgttcagtaatagttatcggaccaaatttgaaattctatcaatgcggtcttcctaagaaa
atggctcttgaattattcaaaccatttgtaattagagaattagttaagagagaaatttca
cacaacgttaaaaacgctaagaaattagtagaaagagaaaacgacaaagtgtgggatgtt
ttggaagatattatagtcgatcatccagtattattaaaccgtgcaccgacattgcacaga
cttggtattcaagcatttgaaccaatattagttgaaggaaaagctatcaaacttcaccca
ttggtatgtactgcatacaatgcggactttgacggtgaccaaatggcagtccatttgcca
ctttcaccagaagcacaagcagaagctagacttttgatgttaagtacaaataacatcctt
gcaccaaaagatggtaagccaattacaactccttcacaagatatggtattgggttcattc
tatatgactactagaaaagaaggtcaaaaaggcgaaggcttaatcttcaaagatattgat
gaaatgatgttggcttatgcaatgcattatgtaacattgcaaacaatagtaaaagttaga
cgtaacagtgtaaataacgatggaacaagtaaaattgtagaaagcactgtcggtagattt
attttcaacgaaggaatccctcaagatttgggaatggtaaatagaaatgaagatccatac
tcacttgaagttgatttacaagttgataagaaaatgctatctaaaattattgatttaact
ttcagaagatatggaaatatcagaactgctgaattgttagactacattaagtctatggga
tacaagtattccacaatcggtgcattgacaatatcaatgggagatattacaattcctgat
tctaagaagggaattattgaacaagcagaacaaagaattgatatggttcaagatatctat
cttcaaggggatattactaacgaagaaagatacaagaaagttatcgaaatttgggaacaa
tgtattaaagatgtaactagagcgttgatgacaaatcttcctgccgacaacaacttgaat
atcatggccgtttctggagcccgtggtagtgaaaaccaaatcagacaattaggtggtatg
cgtggtcttatgtccgatactgctggtaacacaatcgaaattcctatcacatcaaacttc
cgtgaaggtctttccgtacaagagttctttatttcaactcacggttcaagaaaaggtcta
tcagatacagctcttagaactgcggactctggatatttgacaagaagacttgtagatgta
tcacaagatgttatcataactgaagatgattgtggtactgatgagtatatagttgcaaaa
gaaatcaaagacggaaacagacaagttgaagatttaaaatctagaattatcggtagatat
gcatttgaagatattcttgatttggatactggagaaatcattgttcataaaaatgatatg
attaatgaagcaatcgctgaaagaatagaatcaaaaggtatcaaagaagttaaagtaaga
agtgttcttggatgtaagatgaaacacggtgtttgtgctaaatgttacggaagaaactta
gctactggtaagccagtaaacattggtgaagcagttggtattatcgctgcacaatcaatc
ggtgaaccgggtacgcaattgacaatgagaactttccactcaggtggtatcgccggagta
ggaatcacatcaggtcttcctagagttgaagagttatttgaagctcgtaaaccaaaagga
cttgcttacattactgaaatagaaggtactgtaaaaattcaagaaaacaagaagagaaat
gatgtaatcgtaactagtgaagacggagaagaacaagtttatcaaattccatacggcgct
cacatcagagttaacgagggagatcatgtagaaaaaggtgaaccattaacagaaggttca
atcaatccacaagatattctaagagttaacggagcagaaggcgttcgtgattatataatt
agagaagttcaaaaagtttacagactacaaggtgtagacattgatgataagcacatcgaa
attataatcagacaaatgatgagcaaaatcaaagttgaagaaagtggcgattcaggattc
ttatcaggcagcgtagtagatgcaagagatttcaagatgactaatgaacaacttatcaaa
gaaggaaaaactccggcaacaggaactcattccttgatgggtatcacaaaagcatcactt
gcaactgaaagtttcttgtctgcagcatcattccaagaaactacaagagtattaacagaa
acatctattaaaggaaaagtagatcacttaataggcttaaaagaaaatgtaataattggt
aaattaatacctgctggtacaggaatagcaaaatatgacagaattgaagtagattatgat
ggtaaagctgaagatgatatgattgaagctgaaaaagcacaagcgtcaaatgattctgaa
gaagctgaagaatctactataatatctggaaattacgaatcattacaagatgaagataaa
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system