KEGG   Fomitiporia mediterranea: FOMMEDRAFT_115230
Entry
FOMMEDRAFT_115230 CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
fme  Fomitiporia mediterranea
Pathway
fme03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FOMMEDRAFT_115230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fme03021]
    FOMMEDRAFT_115230
Transcription machinery [BR:fme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     FOMMEDRAFT_115230
 Prokaryotic type
  Archaeal type
    TFE
     FOMMEDRAFT_115230
SSDB
Motif
Pfam: TFIIE_alpha TF_Zn_Ribbon TFIIE-A_C zf-TFIIB
Other DBs
NCBI-GeneID: 18670869
NCBI-ProteinID: XP_007272085
JGI: Fomme1_115230
UniProt: R7SG29
Position
Unknown
AA seq 522 aa
MATKEDQENLRLLVQYVSRAFYEPKFVIIMDQLARHPVLKDDDLAGRIGLQAKELNKLMA
VLLNDRLVQVHRQNELKDGAQRSIGKQYYFIDYRHFCNVVKWRVAEMRRLIDSTLRNELD
NKGYICPNCKATFQPLEVDRLMDFQRGAFLCDQCPTSPGGPHEVVLNEDEESVRGSKDRM
ERFNWQTKFIREGLRKSEAMTLPAFDVAVWVKNNVHDAEKQKQAQNGGLKIAGADGKHQD
AGISVMMSIDKDEATRRREREAEAEAKRQQNIMPSWHLKSTISNDLTALGVAAVNQQTNG
KLTGNEAILSSLGKGPTSNGDALRGLGLVKPKMEQVELSPIVEETKPTIDHNADFYEQYY
ASLEAASQAQSASQTPVMPSLSGDFEEEERKPNVAQLDMMNAAAVPNAARKRSLSIDEDS
DRGNKALRDNMGTPVFSRSASGWSSAVNSPVPFSPNSEPGPPQTDLDTSTESMDFGSQPA
IDEPAVMVGGQLMPFSLVTQEIADEKMSPEEYTAWYELLMAQ
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcaacaaaagaggaccaagagaaccttcgactgttggtacaatacgtttctcgcgcc
ttctacgagcccaagttcgtcattattatggaccagctcgcacggcatcctgtcctgaag
gacgatgatttggccgggcggataggattacaagcgaaggagttaaacaagctcatggcg
gtgttgttgaatgaccgattggtacaagtgcatcgacaaaatgagctgaaagatggcgcc
caaaggtccataggaaagcaatattattttatagactatcgacatttttgcaatgtcgtc
aagtggcgcgtcgctgaaatgcggcgtttgattgactcaacactgcggaatgaactcgac
aacaagggttatatctgtccaaattgtaaagcaactttccaaccacttgaagtggatcga
ctgatggatttccaacgaggggcttttctatgcgatcaatgtcctacgtcacccggtgga
cctcacgaggttgtattaaatgaagatgaagaatccgtgcgagggagtaaagaccgtatg
gaacgtttcaattggcaaacgaaattcattcgcgaggggctccgaaagagcgaagccatg
acacttccagcgtttgacgttgcggtgtgggttaagaacaacgtgcacgatgcggagaag
cagaagcaagcgcagaatggtggactgaagattgctggagcagatgggaaacaccaggat
gcgggaattagtgtgatgatgtcgatcgataaagacgaggcgacgcgtaggcgagaacgt
gaagcagaggcggaggcgaaaagacagcaaaacattatgccgtcgtggcacttgaaaagt
acgatttcaaacgaccttacggcgttgggcgttgctgcagtcaatcaacagactaacgga
aagctaactgggaacgaggcgattttgtctagtctggggaagggtccaacttctaacggg
gatgcgttacgtgggttgggcttggtgaagcctaaaatggagcaagtcgaattgagccca
attgtagaagaaacgaaaccaactattgaccacaatgcggacttctatgagcagtactac
gcatctctcgaagctgcgtcccaagctcaatctgcatcacagacaccagtcatgccctcg
ctttcaggcgactttgaagaagaggagcgaaaaccgaacgtcgctcaactggacatgatg
aatgcagcagctgtaccaaatgcagcgagaaaacgttctctgtctattgatgaagacagt
gatcgtggtaacaaggctttgcgtgataacatgggtacaccagtgttttcccggtcggca
agtgggtggtctagcgctgtgaacagccccgtgccattctccccgaactcggaacccggt
cctccgcaaacggatttggacactagtaccgagagtatggactttggcagtcaacctgca
atcgacgaacctgccgttatggttggaggccaactgatgccgttctctttagtgacgcag
gagatcgcggacgagaagatgagtccggaggagtatacggcgtggtatgagcttcttatg
gcacaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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