KEGG   Fomitiporia mediterranea: FOMMEDRAFT_26674
Entry
FOMMEDRAFT_26674  CDS       T03132                                 
Name
(RefSeq) ubiquitin-protein ligase
  KO
K03094  S-phase kinase-associated protein 1
Organism
fme  Fomitiporia mediterranea
Pathway
fme03083  Polycomb repressive complex
fme04111  Cell cycle - yeast
fme04120  Ubiquitin mediated proteolysis
fme04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    FOMMEDRAFT_26674
   04120 Ubiquitin mediated proteolysis
    FOMMEDRAFT_26674
  09126 Chromosome
   03083 Polycomb repressive complex
    FOMMEDRAFT_26674
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    FOMMEDRAFT_26674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fme04131]
    FOMMEDRAFT_26674
   04121 Ubiquitin system [BR:fme04121]
    FOMMEDRAFT_26674
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_26674
Membrane trafficking [BR:fme04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    FOMMEDRAFT_26674
Ubiquitin system [BR:fme04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     FOMMEDRAFT_26674
   Cul7 complex
     FOMMEDRAFT_26674
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     FOMMEDRAFT_26674
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     FOMMEDRAFT_26674
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB DUF615
Other DBs
NCBI-GeneID: 18678665
NCBI-ProteinID: XP_007264008
JGI: Fomme1_26674
Position
Unknown
AA seq 161 aa
MVILRTADKEKFTIDRKVAERMNLIKNLLEDVGEHEEEEIPVQNINSTVMRKVLEWCDYH
QNDPLPAPDESTADESRRRTTDISEWDQKFIQVDQEMLFEIILAANYLDIKALLDVGCKT
VANMIKGKTPEEIRKLFNIANDFTPEEEQQIRRENEWAEDR
NT seq 486 nt   +upstreamnt  +downstreamnt
atggtcatccttcgtacagccgacaaagagaagttcaccatcgaccgcaaggtcgctgag
cggatgaacctcattaagaacttgcttgaggatgttggtgagcacgaggaagaagaaatc
ccagtacaaaacatcaattcgactgtgatgagaaaggtgcttgaatggtgcgattaccac
caaaacgaccctctcccggctcccgatgaatcgacagccgatgaatctcggaggcgcacg
actgacattagcgagtgggaccaaaagttcattcaggttgaccaagaaatgctgtttgag
atcattctcgcagcaaactatctcgacatcaaggctcttcttgatgtcggatgcaagacc
gtcgccaacatgatcaagggcaagactcctgaggagatcagaaagctcttcaacattgct
aatgacttcactccggaggaagagcaacagataaggcgcgagaatgaatgggctgaggat
cgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

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