KEGG   Fomitiporia mediterranea: FOMMEDRAFT_82831
Entry
FOMMEDRAFT_82831  CDS       T03132                                 
Name
(RefSeq) DEAD-domain-containing protein
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fme03041]
    FOMMEDRAFT_82831
   03009 Ribosome biogenesis [BR:fme03009]
    FOMMEDRAFT_82831
Enzymes [BR:fme01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     FOMMEDRAFT_82831
Spliceosome [BR:fme03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    FOMMEDRAFT_82831
Ribosome biogenesis [BR:fme03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    FOMMEDRAFT_82831
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 DGCR6 DUF2738
Other DBs
NCBI-GeneID: 18680093
NCBI-ProteinID: XP_007265516
JGI: Fomme1_82831
Position
Unknown
AA seq 782 aa
MALDDLIMTIDSDAEDTVEEPRKPAKDTLNPEFTFDVTGDVYDEVLNGQDGLGDLVKGSK
REPVSVDDIIARRKLTDASNKRKRAYDTEDNDDDDEDEDEDEGEGDEEEDLGDEELKSDD
PLATSEDEEDDADQLSEAELDDETDNASDSDGSSGTEEETQAEKERKAAYFASPDDPSVS
GQVHTSFTTMSLSRPLLKALTALGFSTPTPIQVATIPVALLGKDVVGNAVTGSGKTAAFM
IPVLERLMYRERGKNKAAVRCVVLVPTRELGVQCVDVAKKLSAFMDVRISLIVGGLSLKS
QEAELRTRPDIVIATPGRLIDHLRNSPSFGLETLDVLILDEADRMLSDGFADELKEIIQA
CPTSRQTMLFSATMTDDVDALVRMSLNRPVKLFVDPKRSTARGLIQEFVRVRAGKEAERA
ALLVALCKRTFKQGVIVFFRSKKLAHQMRVVFGILGMKAEELHGDLTQEQRLRALQLFRD
GAVDFLMATDLASRGLDIKGIEAVVNYDMPGQLAQYLHRVGRTARAGKKGRSVTLVGEAD
RKILKAAIKHASDVDKVRHRTIPSDQVSIWAKRLAEINDEITEVLKEEKEEKALRLAERE
LKKGENMIEHEKEIFSRPARTWFQSEKEKLNAKEISKKQYEIAAGATSPSKGKNKEVQAD
AKPKRDKFAGLSRRAKRRKLALEEGAAETTAVRAAVRNAKKAGRPTKIGMPEPKQQNPAK
SKGSGKDRRGKAGRVTGRKGVFDNEMGGKRKPSINEGARANRTDRIGGMGKKGPKGKGKG
KR
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggcactcgatgaccttattatgacaattgattcggatgcggaagacactgttgaggag
ccaaggaaacctgcaaaagatacgctgaacccagagttcacgttcgacgtgactggggac
gtatacgacgaggtactaaatgggcaggatggtctgggagacttagttaaaggctcaaaa
cgggaacctgtttcggtagacgacattattgcgcgaagaaagctgaccgatgcttcgaat
aaacgaaagagagcatatgacacggaagataatgacgacgatgatgaagacgaggacgag
gacgagggcgagggcgatgaagaagaagatctcggtgatgaggagttaaagagcgacgat
ccattagcaacatcagaggatgaagaggacgatgcagatcaactctctgaagccgagtta
gacgacgaaacggacaatgcctcagactcagatggctcctctggcactgaggaagaaact
caagccgaaaaggaacggaaagcagcgtatttcgcttctccagatgacccttcagtgtct
ggccaagtacatacatcttttacgacaatgtctctttctcgacccctcctaaaagctctt
actgcacttgggttttcgacaccaacacccatccaagttgccactatccctgtcgctctt
ctggggaaggatgttgtcggaaacgcggtcactgggtccggaaagacagcggcgttcatg
attcctgtccttgagcgtctaatgtaccgtgagcgcgggaagaacaaagcggcggtccgc
tgtgttgtgcttgttccgacgcgcgagcttggtgtgcagtgtgtagacgttgcaaagaag
ctctctgcattcatggacgtacgaatatctttgatagttggtggactttctcttaaatcg
caggaagcagagcttcgaacgcgtccggacatcgttatcgcaacacctggccgacttatc
gaccatctgcgtaactccccttccttcgggctggagacccttgatgtgctcattctggac
gaggccgatcgaatgctttccgatggattcgcagatgaattgaaagaaatcatacaagcc
tgtccaacttcgcggcagacgatgcttttttccgcaacgatgacggacgacgtggatgca
cttgtgcggatgtcactcaaccgaccagtgaagctatttgtggatccgaaacggagcacc
gcacgcgggcttatccaggaatttgtccgcgttcgtgctggaaaagaggccgagcgcgcg
gcgttgcttgttgcattgtgtaaacggacgtttaagcagggtgttatcgttttcttcagg
agtaagaagcttgcgcaccaaatgcgagttgtgttcgggattctcggtatgaaggcggag
gaattacacggcgaccttactcaggaacagcgtcttcgcgctctgcagctgttccgtgat
ggtgcggtggattttttaatggcaacggatctcgcctctcggggtcttgacatcaaaggt
attgaggcggttgtcaactacgacatgcctggtcaactggcacaatatcttcatcgagtt
gggcgaacggctcgtgccggaaagaaaggacgatcggtgaccttagttggagaggctgac
cggaagatactcaaagctgctatcaaacacgcctctgacgtagacaaggtccggcatcgt
acaatcccgtccgatcaggtgtcaatatgggcgaagcgactggcggagatcaacgatgag
ataacagaggtattaaaggaagagaaggaagagaaggcgttacgattggcggaaagagag
ctgaaaaagggagagaatatgattgaacatgagaaggagatcttttctcggcctgcacga
acgtggtttcaatccgagaaggaaaagctcaatgcaaaagaaattagcaagaagcagtat
gagatagctgcaggtgccacttctccgtcaaaagggaagaataaagaggtgcaggcagat
gcaaagcctaaacgggataaatttgccgggctttcgcgccgggcaaagcgaagaaagctc
gcacttgaagagggtgcagcggaaaccacagctgtgcgtgcggctgtccgaaacgcgaag
aaggctggacgaccaacgaaaattggcatgccggaaccaaaacaacagaacccggctaaa
tcaaaaggctcagggaaggacaggagggggaaagcaggtcgggtgaccggtcggaaagga
gtatttgacaatgagatgggagggaaacggaaaccaagcataaacgaaggtgccagagcc
aataggaccgatagaatcgggggtatgggcaagaagggtccaaaagggaaggggaaaggg
aagcggtga

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