KEGG   Fomitiporia mediterranea: FOMMEDRAFT_91457
Entry
FOMMEDRAFT_91457  CDS       T03132                                 
Name
(RefSeq) mago nashi domain-containing protein
  KO
K12877  protein mago nashi
Organism
fme  Fomitiporia mediterranea
Pathway
fme03013  Nucleocytoplasmic transport
fme03015  mRNA surveillance pathway
fme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOMMEDRAFT_91457
  09122 Translation
   03013 Nucleocytoplasmic transport
    FOMMEDRAFT_91457
   03015 mRNA surveillance pathway
    FOMMEDRAFT_91457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fme03019]
    FOMMEDRAFT_91457
   03041 Spliceosome [BR:fme03041]
    FOMMEDRAFT_91457
Messenger RNA biogenesis [BR:fme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     FOMMEDRAFT_91457
Spliceosome [BR:fme03041]
 Complex C
  Other components
   EJC/TREX
    FOMMEDRAFT_91457
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 18680611
NCBI-ProteinID: XP_007269178
JGI: Fomme1_91457
Position
Unknown
AA seq 135 aa
TGHSGKHGHEFLEFEYSHGRLRYANNSNYRNDSLIRKEMWIGPLVVKELKRIVESSEIIK
EDDQNWPKKNIVGKQELEIRVGNDHIAFETAKIGSLVDVQDSEDPEGLRVFYYLVQDLKC
LIFSLISLHFKIKPI
NT seq 408 nt   +upstreamnt  +downstreamnt
acgggccactcaggcaagcatggacacgagttcctagagttcgagtattcccatggacgt
ttacgatacgccaacaactcgaactaccgtaatgacagtctgattcgtaaagagatgtgg
attgggccgttggtggtgaaagaactgaagagaatcgtcgagtcgagcgagatcatcaag
gaagacgaccagaactggccaaagaagaacatcgttgggaagcaggagttggaaatccga
gtggggaatgatcatattgcctttgaaacagcaaagatcggctcgttggtcgacgtacag
gacagcgaggacccagaaggcttacgcgtgttctactacctcgttcaggacctcaagtgt
ctcattttttctcttatttctctccacttcaaaatcaagcctatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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