KEGG   Francisella noatunensis subsp. orientalis Toba 04: OOM_1180Help
Entry
OOM_1180          CDS       T02112                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fna  Francisella noatunensis subsp. orientalis Toba 04
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:fna00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    OOM_1180
Enzymes [BR:fna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     OOM_1180
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     OOM_1180
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1190481..1191350)
Genome map
AA seq 289 aa AA seqDB search
MLSYSNLNFYSNIKFMPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPIDKAQLLLL
KNKVIKDIQRRGKHLIIILEDNLQLIIHLGMSGVVKIVNTFEYNKIKHDHIILEFSNNLN
LVYNDPRKFGYWLVNTNKMPLEHKVLAAHGVEPLTDDFNAEYLISKLKKTTRKIKQTIMD
NSIVVGVGNIYASEALFDSNILPTRASNSITKKEAERLVTSIKKILDKAIAEGGTTLKDY
KNIEGKPGYFTQQLNVYGRANQNCLICSTKIESLVIAQRNTFFCKKCQK
NT seq 870 nt NT seq  +upstreamnt  +downstreamnt
atgttatcatatagtaaccttaatttttatagtaatattaaatttatgcctgaacttcct
gaagtagagactgtcaaaagaggtttaaccaaaaatattattagcaaaaagattaaaagt
gtacagataaatactgataagcttcgctatcccatagataaagctcaacttctattacta
aaaaacaaagttataaaggatatccaaagaagaggtaagcatttaattattattctagaa
gataacttacagttaattattcatctaggtatgtcaggtgtcgttaaaattgtaaatact
tttgaatacaacaagataaaacatgaccacattattttagaattttctaacaacttaaat
ctagtttataatgacccgcgtaaatttggatactggttagtcaatactaataagatgcca
ctagaacacaaagttttagccgctcatggagttgaacctttaacagatgatttcaatgct
gaatatttgatatctaaattaaagaaaacgactagaaagatcaaacaaactataatggat
aatagcatagttgttggcgtaggaaatatatatgctagtgaagcattatttgatagtaat
atcttacccacaagagcttctaactccatcacaaaaaaagaagctgagaggcttgtaact
tcaattaagaaaatacttgataaagcaattgccgaaggtggtacaacactcaaggactat
aaaaatatagaaggtaaacccggttatttcactcaacaactcaatgtttatggtagagct
aatcaaaactgtctcatctgtagtactaaaattgaaagcttggtgatagcccaaagaaac
acatttttttgtaaaaagtgtcagaaataa

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