KEGG   Formosa sp. Hel3_A1_48: FORMA_09270
Entry
FORMA_09270       CDS       T04482                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
foh  Formosa sp. Hel3_A1_48
Pathway
foh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:foh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FORMA_09270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:foh03400]
    FORMA_09270
Enzymes [BR:foh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     FORMA_09270
DNA repair and recombination proteins [BR:foh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     FORMA_09270
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 UvsY
Other DBs
NCBI-ProteinID: AOR26097
UniProt: A0A1D7XRZ2
Position
978722..979486
AA seq 254 aa
MKIVSYNVNGIRAALKKGFLEWLVATDPDVICLQEIKAQEEQLDLGVFESAGYPYNYWFS
AQKKGYSGVAILSKIKPKNIVYGTGIESMDFEGRNIRADFSDISVMSMYLPSGTNIQRLE
HKFEYMDLLQNYVDELKKELPNLVICGDYNICHEAIDIHDPVRNKNVSGFLPEERAWMTN
FLKSGFIDAFRALNNAPHQYSWWSYRANARANNKGWRLDYTLVSTPLKENIKRAVILTEA
VHSDHCPVLLELNL
NT seq 765 nt   +upstreamnt  +downstreamnt
atgaaaattgtttcttataatgtcaatgggattagagccgcactaaaaaaaggctttttg
gaatggctggtggcaaccgaccctgatgtgatttgtttacaagaaataaaagcccaagaa
gaacagttagatcttggggtttttgaatctgctggatatccctataattactggtttagt
gctcaaaaaaaaggatatagtggtgttgctattttatccaaaataaaaccaaaaaacata
gtttatggcactggaattgaatccatggattttgaaggtcgtaatattcgcgctgatttt
tctgatatttctgtcatgagcatgtacttgccttcaggaactaatattcagcgcttagaa
cataaatttgaatatatggatctactccaaaattatgttgacgaattaaaaaaagaattg
ccaaatcttgtgatatgcggcgattacaatatatgccacgaagcgattgatattcacgat
cccgttcgcaataaaaatgtatctggatttttacctgaagaacgagcatggatgacaaat
tttttaaaaagtggttttattgatgcgtttagagccttgaacaatgcaccccatcaatac
agttggtggagctatagagccaatgcacgtgccaataacaaaggatggcgcctggactat
acattagtttcgacacctttaaaagaaaacataaaaagagccgttatactaactgaggca
gtccacagtgaccactgccctgtattattagaattgaatctataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system