KEGG   Faecalibacterium prausnitzii SL3/3: FPR_23300Help
Entry
FPR_23300         CDS       T02592                                 

Definition
ATP-dependent DNA ligase (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
fpa  Faecalibacterium prausnitzii SL3/3
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:fpa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    FPR_23300
   03420 Nucleotide excision repair
    FPR_23300
   03430 Mismatch repair
    FPR_23300
   03450 Non-homologous end-joining
    FPR_23300
Enzymes [BR:fpa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FPR_23300
DNA repair and recombination proteins [BR:fpa03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FPR_23300
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2362842..2364173
Genome map
AA seq 443 aa AA seqDB search
MTDKELIGKLNAMVKALQKAKKKTDKTRILLDARKDFGDEADELMAFFKFLLDPAIVTGL
SDAKINKKVTAKPDIDIQYLSCGYLYIMGAGHNTGSDASIVTIQNYLHKNPEYEEFLKRL
FTKNLPIGVEAATINKVYGEEIIPVWEVQQGYPIDKVKLKDGIWFSLSQKMNGNRGTMYK
GELISRQAQKFKGLDHIKNDLLALYDEDASRRDAWVFDGELIYKNPERMSDGEAFRYGTG
LLNSDNKDKTGIKFVIFDVIPVVEFDRGKCTIPYKIRRIGLNCLRAEITRKHLENIEIVP
MVYEGTDQSVIPKWLDYAVEHDWEGLMLNTDVPYRRARHNGCLKIKRFYTVDLRITAIEE
GQNRLAGTMGALVVDYKGNELRVGSGFDDATRAAVWANPDNYIGKIVECKYKEVTMDKKT
GLESLQFPTFVRFRDDKNEVSYG
NT seq 1332 nt NT seq  +upstreamnt  +downstreamnt
atgacagataaagagctcataggtaagcttaatgcgatggttaaggcattgcagaaagca
aagaaaaagacggacaagacccgcattttgttggatgcacgtaaggattttggagatgaa
gctgacgagctaatggcattcttcaaattcctgcttgacccagcgattgtgactggcctg
tctgatgcaaagatcaacaagaaggtaacggcaaagcctgatatcgatattcagtatctc
agctgcggatacctttatattatgggtgctgggcataatactggctctgatgcatccatt
gtaacaatccagaattatttacataaaaatcctgaatacgaagagtttctgaagcgactg
ttcactaagaacttgccgattggagtcgaggcagcgaccatcaataaagtgtacggcgaa
gagattattccagtctgggaggtccagcagggatatccgattgataaggtaaagctgaag
gatggcatttggttcagtttgagccagaagatgaatggcaataggggcaccatgtataaa
ggcgagctcatctctcggcaggctcagaagtttaaagggctcgaccatataaagaatgat
ctgctcgctctatacgacgaagacgcctcaaggcgagatgcgtgggtgtttgatggtgag
ctgatctacaagaacccagaaagaatgtcggacggagaggcttttcgttatggcactggc
ctacttaattctgataacaaggacaagactggaatcaaatttgtgatttttgatgtgatt
cctgttgtagagttcgaccgtggaaagtgtactatcccatataaaattcgccgtattggg
ttaaattgtcttcgcgcagagattactcgcaagcaccttgagaatattgaaattgttcca
atggtatatgaaggtactgaccagagtgtgattccgaagtggcttgattatgctgtcgaa
cacgattgggaaggtcttatgttgaacacggatgtcccttatcgccgggctcgtcacaac
ggatgtctcaaaatcaagcgattctatacggtcgatctgcgaatcacagcgattgaggaa
ggtcagaaccgtctggctggtacgatgggcgctcttgttgttgactacaagggtaacgaa
cttcgtgttggttccggttttgatgatgctacgagagctgctgtgtgggcgaatcccgat
aattacatcggtaagattgtggaatgtaagtacaaagaggtcacgatggacaaaaagact
ggccttgagtctctgcaattcccgacgtttgtacgattccgagatgataagaacgaagta
agctacggctaa

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