KEGG   Francisella persica: ACH24_01880
Entry
ACH24_01880       CDS       T04357                                 
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fper  Francisella persica
Pathway
fper03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ACH24_01880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fper03400]
    ACH24_01880
Enzymes [BR:fper01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     ACH24_01880
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ACH24_01880
DNA repair and recombination proteins [BR:fper03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ACH24_01880
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DUF4428
Other DBs
NCBI-ProteinID: ALB01515
UniProt: A0A0K2JQM8
Position
complement(459328..460152)
AA seq 274 aa
MPELPEVEIVKRGLIKTIIDKTILDIEINTDKLRYTIDKNQLVKIKNKVVKQIQRRGKHL
IVIIENDLQLIIHLGMSGVIKVIDSANYNKIKHDHIVVKLSDNLNLVYNDPRKFGYWLVN
TNHNPLRHRVLVSHGVEPLTADFNGDYLVSKLKHTSRKIKQTIMDNNIVVGIGNIYASET
LFDSNILPTRASNTITKKEIYELVYSIKKILEKAIIQGGTTLKDYKNTEGKPGYFTQQLN
VYGRANQQCYVCNTKIESLVIAQRNTFFCKKCQK
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcctgaacttcctgaagtagaaatagtaaaaagaggcttaattaaaactatcatcgat
aaaactatacttgatattgaaattaatactgataagcttcgctatactattgataaaaat
cagttagtaaaaattaaaaataaagtagtcaaacaaattcaacgcagaggtaaacactta
atagttattattgagaatgacttacaattaattatccacctaggtatgtctggagtcatt
aaagttatagactcagcaaactacaacaaaattaaacatgatcatatcgttgtaaaacta
tcagataatctaaatttagtatacaatgatccacgcaaatttggttattggctggtaaat
actaatcacaatcctcttagacatagagttttagtatcacatggtgttgaaccattaaca
gctgattttaatggtgattatctagtttctaaacttaagcatacatcaagaaaaatcaag
caaacaattatggataataatattgtcgttggtattggtaatatttatgccagtgaaaca
ctatttgatagtaatatcttgccaacaagggcttctaatactatcactaaaaaagaaata
tacgaactagtatattctattaaaaaaatacttgaaaaagctatcattcaaggtggaact
acacttaaagattataaaaacactgagggcaagcctggttattttactcaacaactaaat
gtctacggcagagctaaccagcaatgttatgtatgtaatacaaaaatagaaagtttagtt
atagctcaaagaaatacttttttttgtaaaaagtgccaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system