KEGG   Falco peregrinus (peregrine falcon): 101916555
Entry
101916555         CDS       T02856                                 
Symbol
DDB1
Name
(RefSeq) damage specific DNA binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
fpg  Falco peregrinus (peregrine falcon)
Pathway
fpg03420  Nucleotide excision repair
fpg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fpg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101916555 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101916555 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fpg04121]
    101916555 (DDB1)
   03400 DNA repair and recombination proteins [BR:fpg03400]
    101916555 (DDB1)
Ubiquitin system [BR:fpg04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     101916555 (DDB1)
DNA repair and recombination proteins [BR:fpg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101916555 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101916555 (DDB1)
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 101916555
NCBI-ProteinID: XP_013159463
Position
Un
AA seq 1084 aa
MYGKTAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPS
ETGIIGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAP
TICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQES
ITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVT
LKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNL
GPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSD
SHRETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASV
RLVSQEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEH
EVACLDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF
ESSHYLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRP
TVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVP
LYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTA
PHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMV
YPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAE
KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA
VEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQN
LGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSF
HTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEEL
TRIH
NT seq 3255 nt   +upstreamnt  +downstreamnt
atgtacggcaagactgctgtcatggaactcttccgccccaagggggagagcaaggatttg
ttgttcatcctgacagccaagtataacgcctgcatccttgagtacaagcagaacggggac
agcattgatattataacccgtgcccatggcaacgtgcaggatcgcattggccgtccctca
gagactggcataattggcatcattgacccagagtgccggatgatcggcctgcggctctat
gatggccttttcaaggtcattcccctggaccgggagaacaaggagttaaaggcttttaac
atccgcctggaagagctccaagtcatcgatgtgaagtttctctatggctgtcaggctcca
accatctgctttgtctaccaggaccctcagggtcgccatgtcaagacgtacgaggtgtcc
ctgcgcgagaaggagtttaacaaaggcccttggaaacaggagaacgtagaggctgaagcc
tccatggtcatcgcagtgccagagccttttgggggtgcgatcatcattgggcaggagtct
atcacctaccacaacggagataaatacctagctatagctccacctatcatcaagcaaagt
acaattgtgtgccacaaccgtgtggatcccaacgggtcccgttacttgctgggggacatg
gaagggcgcctcttcatgctgctcctggagaaggaggaacagatggacggcactgtcacc
ttgaaggacctgcgtgtagaactgcttggggagacgtccattgcagagtgcttgacctac
ctggacaatggagttgtgtttgtcggctctcgtcttggggattcccaacttgtgaagctc
aacgtggacagcaacgagcagggctcctatgttgtggctatggagaccttcaccaacctc
gggcccatcgtcgacatgtgtgtggtagacctggaaagacaaggccaggggcagctggtc
acatgctcaggtgcatttaaagagggttcgctgcggatcatccggaacggcattgggatt
catgagcacgccagcattgacttgccagggattaaaggtttgtggcccctgaggtcagac
tctcaccgtgaaacagacaacacgttggtgctgtcctttgtgggccaaaccagagttctg
atgctaaatggagaggaagtagaagagacagagctcacagggtttgtggatgatcagcag
actttcttctgcggcaatgtggcacatcagcaattgatccagatcacctctgcctctgtg
agactggttagtcaggagcccaaagccctggtgagtgagtggaaagagcccaacgggaag
aacatcagtgtggcttcttgtaacagtaaccaggtagtggtggctgtgggacgagccctg
tactacctggagatccgaccccaggagctcaggcagatcagctgcacagaaatggagcat
gaagttgcctgcctggacatcacccctttgggggacactaatggcatgtccccactgtgt
gcgatcgggctttggactgacatctctgcccgcatcctaaagctgccttcgtttgaactg
ctgcacaaggagatgctgggaggagaaattatccctcgctccatcctgatgacgaccttt
gagagcagccattaccttctgtgtgccctaggggatggagctctcttctactttgggctc
agccttgagacaggcttgctgagtgaccggaagaaggtgacccttgggacccagcccacc
gtcctgaggacgttccgctctctgtccaccaccaacgtgtttgcctgctctgaccgcccc
accgtcatctacagcagtaaccacaagctggtcttctccaatgtcaacctgaaggaggtg
aactacatgtgtcctctcaactcagatgggtatcccgacagtttggccttggccaacaac
agcaccctgacaattggcaccattgacgagatccagaagctgcacatccgcacggttccc
ctctatgaatcacccaggaagatctgctaccaagaggtatcgcagtgtttcggcgtgctc
tcgagtcgtatcgaggtgcaggatgccagtgggggcaccactgcactcagacccagcgcc
agcacgcaggccctgtccagcagtgtgagcaccagcaagctgttctccagcagcacagcg
ccgcatgagacatcctttggagaggaggtggaggtgcacaacctgctcatcatagatcag
cacaccttcgaagtgcttcatgctcaccagtttctgcaaaacgagtacgctctcagcctg
gtctcctgcaagctcggcaaggacccaaacacctacttcattgtgggcaccgccatggtg
tatcctgaggaggcagagcccaaacaaggccgcatcgttgtcttccactactcggatggg
aagctgcagagcctggctgagaaggaggtcaagggggctgtgtattccatggtggagttc
aatgggaagctgttagccagcatcaacagcacggtgcgcctgtacgagtggacagctgag
aaggagctgcgcacggagtgcaaccattacaacaacatcatggcactctacctgaagact
aagggggacttcatccttgtgggagatctgatgcggtctgtcctcctcctggcatacaag
cccatggaaggaaacttcgaggagattgcccgggacttcaatccaaactggatgagtgcc
gtggagatcctggacgatgacaacttcttgggagcagagaatgctttcaatttgtttgtg
tgccagaaggacagcgcggccacgaccgatgaggagcgccagcacttgcaggaggtgggg
ctgtcccacctgggagagtttgtcaatgtcttctgtcacgggtctctggtcatgcagaac
ctgggggagacatctacaccaacacagggctctgttctcttcggcacagtcaacggcatg
attggactggtgacctcactgtcagagagctggtacaacctcctgctggacatgcagaac
aggctgaataaagtcatcaagagcgtgggcaagattgagcactccttctggaggtcgttt
cacactgaacgcaaaacagaaccggctacggggttcattgatggtgacctgattgaaagc
ttcctggacatcagcaggcccaagatgcaggaggtggtggcaaacttgcagattgacgac
ggtagcggcatgaagagggaagccactgtagacgacctgataaagattgtggaggagctg
acccggatccattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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