KEGG   Francisella philomiragia: Fphi_0238Help
Entry
Fphi_0238         CDS       T00652                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fph  Francisella philomiragia
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:fph00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Fphi_0238
Enzymes [BR:fph01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Fphi_0238
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Fphi_0238
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
250360..251229
Genome map
AA seq 289 aa AA seqDB search
MLSYSNLNFYSNIKFMPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSL
KNKVVKNIQRRGKHLIIYLEDNLQLIIHLGMSGVVKIINTSEYNKIKHDHIILELSDDLN
LVYNDPRKFGYWLVNTNKMPLEHRVLATHGVEPLTDDFNTEYLISKLKKTSRKIKQTIMD
NSIVVGVGNIYASEALFDSNILPTRASNTITKKEAERLVTSIKKILDKAIAEGGTTLKDY
KNTEGKPGYFTQQLNVYGRANQNCYVCSTKIESLVIAQRNTFFCKKCQR
NT seq 870 nt NT seq  +upstreamnt  +downstreamnt
atgttatcatatagtaatcttaatttttatagtaatatcaaatttatgcctgaacttcct
gaagtagagactgtcaaaagaggtttaaccaaaaatattattagcaaaaagattaaaagt
gtacagataaatacggataagcttcgctatcccgtagataaagcccaacttctatcactg
aaaaacaaagtcgtaaaaaatattcaaagaagaggtaagcatctaattatttatctagaa
gataacttacagttaattattcatctaggtatgtcaggtgtcgttaaaattataaatact
tctgaatacaacaagatcaaacatgaccacattattttagagttatctgatgatttaaat
ctagtctataatgatccgcgtaaatttggatattggttagtcaatactaataagatgcca
ctagaacacagagttttagccactcatggagttgaacctttaacagatgatttcaatact
gaatatttgatatctaaattaaagaaaacctctagaaaaatcaaacaaactatcatggat
aatagcatagttgttggcgtaggaaatatatatgccagtgaagcattatttgatagtaat
atcttacccacaagagcttctaacaccatcacaaaaaaagaagctgagaggcttgtaacc
tcaattaagaaaatacttgataaagcaattgccgaaggtggtacaacactcaaggactat
aaaaatacagaaggtaaacccggctacttcacgcaacaactcaatgtttatggcagagcc
aatcaaaactgttacgtctgtagtactaaaatcgagagtttagtgatagcccaaagaaac
acattcttttgcaaaaaatgtcaaagataa

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