KEGG   Francisella philomiragia O#319-029: BF30_1519
Entry
BF30_1519         CDS       T03617                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
fpi  Francisella philomiragia O#319-029
Pathway
fpi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fpi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BF30_1519 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fpi03021]
    BF30_1519 (rho)
   03019 Messenger RNA biogenesis [BR:fpi03019]
    BF30_1519 (rho)
Transcription machinery [BR:fpi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BF30_1519 (rho)
Messenger RNA biogenesis [BR:fpi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BF30_1519 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT AAA ResIII AAA_22 DUF3086
Other DBs
NCBI-ProteinID: AJI47407
UniProt: A0A0E2ZXI1
Position
complement(1552132..1553394)
AA seq 420 aa
MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRDNEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSNEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFD
RSGTRREELLTTPEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaacttaaatgaattaaagtataaatctgttaatgagctaatggatatagctcaaagt
ctagatcttgaatcacttcgtgcaagaaaacaagaacttatcttctcaattcttaaatac
catgccgataagggtgaagatatatatggcgaaggtatcttagaggttctacaagatggc
tatggcttcttgagatcttctgatagctcatattttgcatctccagatgatatctatgtt
tcacctgcttttatcagaaagctaaatctaagaactggtgatagtattgttggcaagatt
cgtccacctcgtgataatgaaaaatactttgcagtaaagcatattgacagtgttaacttt
gattcaccagaattagctaggaaaaaaatattatttgaaaacttaactcctgagtatgct
aaagaaaggctaactatggaaatagggaatggttcaaatgaagatattacggcaagagtc
atcgacttagctgctccatttggtaaaggtcagcgtggtctaattgttgcgcctccaaaa
actggtaaaacaattatgatgcaaaatatcgcaacatcaattgctaagaaccatccagaa
tgtaatctaatcatgctactgatcgatgagcgtcctgaggaagttacagaaatgcaacgc
tcagtgcgtggtgaagtagtagcatctactttcgatgaacctgcagctcgtcatgtccag
ttagctgaaatcgtaatcgaaaaagcaaaaagactggttgaacacaaacaagatgtagta
attctacttgactcaatcacaagacttgcacgtgcttataacactgtatcaccagcttct
gggcgtgtactatctggtggtgtagaggcgaatgctctgcaaaagcctaagagattcttt
ggtgctgcgcgtaatactgctgaaggtggtagcttgacaatcattgcaacagctcttgta
gagactggctctaagatggatgaggttatctttgaggaatttaaaggtactggtaacatg
gaacttcatcttgatcgtaagattgcagagcgtcgcgtattccctgctattagttttgat
agatctggtacgcgtagagaagagcttcttacaactcctgaagaactacaaaaactttgg
gtactacgtaagattcttggtggtatggaagatgttcaagctatggaattcctaacagaa
aaaatgaaaggttcattaactaatgaagagttcttcgagactatgaaaagaggtgctatt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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