KEGG   Francisella philomiragia O#319-029: BF30_268
Entry
BF30_268          CDS       T03617                                 
Name
(GenBank) hypothetical protein
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
fpi  Francisella philomiragia O#319-029
Pathway
fpi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BF30_268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpi03400]
    BF30_268
Enzymes [BR:fpi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     BF30_268
DNA repair and recombination proteins [BR:fpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     BF30_268
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BF30_268
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BF30_268
SSDB
Motif
Pfam: RNase_T Exonuc_X-T_C
Other DBs
NCBI-ProteinID: AJI47270
Position
complement(262622..264070)
AA seq 482 aa
MFQNQTFLFYDSETTGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPIATI
THHISIAQANTGVSEYQAIRKIHKIINTPGTISIGYNTLGFDDEFLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYYLFCNDVLKWPKVLDEEGQPKISLKLENLNTENNLYSGGRAH
DAITDVIVTVELAKKLRIANPKMWQFLLAKFNKQNDENTLAQLDISVEVGGIGYRQAIAV
SGVFGFKNNFMSAILDIGQHRHYKNQEIFLRLDSYDFKDFIEEFGSLEAEHWRLTVNKKW
GDIPLILPAKTRFVGRLPQDRLDLIKTNKEFIRSNQEIFANFVDYVLEYKYPEIENVDID
AAIYQSDFMSAADERGCDKFHTSQIYQKAQMLNQLPKSYYDRAVRIIGRLDFSKLPDKAQ
MEFQDYLNKIVSLDNDELLIDHKGKTRKTLEDIYQEMQDLRMNRDLTEEQQALLYELEEY
LF
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgtttcaaaatcaaacttttttattttatgactcagaaactactggtattaacaattct
tttgaccaagtattacaatttgctgcgattcgtacagatttggactttaatgaaattgaa
aggtttaatttttttgtgaagctaaatcctgatacaactccatctccaattgcaacgata
acgcatcatatttctattgctcaagcaaatactggtgtgtcagaatatcaggcaattaga
aaaattcataaaatcataaatacaccagggactattagtataggttataatacccttggt
tttgatgatgagtttttgagatttgctttttataaaaatatgctacctccatatagtcat
caatttaaaaatggttgttcaagggctgatttgtttccaatagttacttgctattatttg
ttttgtaatgatgttcttaagtggcctaaagttcttgatgaagaaggacagccaaaaata
tctttgaagttagaaaatttaaatacagaaaataatctctatagtggtggtagagctcat
gatgctattacagatgtaattgttacagtagagttagccaaaaaattaagaatagctaat
cctaaaatgtggcagtttttattggcaaagtttaataagcaaaatgatgaaaatactcta
gctcaactagatatcagtgtagaagttggtggtattgggtatagacaagcaattgcagta
agtggagtttttggctttaaaaataattttatgtcggccatattagatattggtcagcat
aggcattacaaaaatcaagagatatttcttcgcttagatagttatgattttaaagatttt
atagaagagtttggcagtttagaagcagaacattggcgactgactgtaaataaaaaatgg
ggtgatattccgctaatattacctgctaaaacccgttttgtggggaggttgcctcaagat
agactagatttgataaagacgaataaagaatttataagaagcaatcaagaaatatttgct
aattttgttgattatgtattggagtataagtatccagagattgaaaatgttgatatagat
gcagcgatttatcaaagtgactttatgagtgccgctgatgaaaggggttgtgataaattt
catacttcacaaatttatcaaaaagcgcaaatgcttaatcaattaccaaaatcttattat
gacagagctgtcaggataattggtagattagacttttcaaaactacctgataaagcacag
atggaatttcaagattatctaaataagattgttagcctagataatgatgagcttctgatt
gatcataaaggcaaaactcgcaaaacgttggaagatatctatcaagaaatgcaagattta
cgcatgaatcgtgatctaacagaagaacaacaagctttgctatatgagttagaggagtat
ttgttttag

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