KEGG   Francisella philomiragia GA01-2801: LA02_1880
Entry
LA02_1880         CDS       T03621                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpj  Francisella philomiragia GA01-2801
Pathway
fpj03410  Base excision repair
fpj03430  Mismatch repair
fpj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LA02_1880 (recJ)
   03430 Mismatch repair
    LA02_1880 (recJ)
   03440 Homologous recombination
    LA02_1880 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpj03400]
    LA02_1880 (recJ)
DNA repair and recombination proteins [BR:fpj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LA02_1880 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LA02_1880 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LA02_1880 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHHA1 DHH
Other DBs
NCBI-ProteinID: AJI57161
Position
1856133..1857875
AA seq 580 aa
MLIRQKQTNQDILSTLLSKGYDLFLARIICSRVSNFENIDLILKGSIKDLSSPFLFKDID
KAVDRLFQALQNNKVIGLETDHDCDGQTSHAILYEALTKIFNYPKDKIRSYIGHRMLEGY
GLSESLMNRILTDSNRPSLIITADNGSTDEPRIAVLKQNGIDTIVTDHHGIPPEGAPKSA
IAVLNPTQHDCNYPDKAIAGCMVAWLFMTALRRKYLQNGKSLSKSYGLSNLLDFVAIGTV
ADCVSMANSHNNRIVTKLGIEQLKNNDRLCWDFLDKEKLSSEYISFSIAPLLNSDGRVSD
ALGSVSFLLENDERKIEETYENLTKQNSQRKEIQKKLTHEAITKAYQLDNDSNSLCILLD
DGHSGIHGITASRVKEMFGKPVIIFSETQNDPNLISGSARSVDSINIKTILDTIALKSPA
LMIKYGGHKGAAGLTINKSDFDTFYDLFESEIINFIKNDSISLEPILEYDFELDENDFKL
QTLEKIESLEPFGREFEKPLFYNSFTIENLRLVGKDKNHAQLILRYKNIPSIKAIWFNAL
ENKIIEQIGIGDTIRACYELQKEEFLGQTNLSLNIKLIEK
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgttaataagacaaaaacaaactaatcaagatatattatctaccctattatcaaaaggt
tatgacttatttttagcacggattatctgttctagagtaagtaattttgagaatattgat
cttatactaaaaggctctataaaagatctatcatctccatttctattcaaagatattgat
aaagctgtagatagactttttcaagcattacaaaataataaagtcattggactagaaaca
gatcatgactgtgatggtcaaacatctcatgcaattttatatgaagctctgacaaagata
tttaattatcctaaagataagattcgctcctatataggtcatagaatgctagaaggatat
ggtctatcagagtctttaatgaatagaatattaacagacagtaatagacctagtcttatc
ataacagctgacaatggttcaacagatgagcctaggattgctgttcttaaacaaaatggt
attgatactatcgtaactgatcaccatggtattcctcctgagggagcacctaaaagtgct
atcgccgtactaaaccctactcaacatgattgtaattatccagataaagctatagctggc
tgtatggttgcttggctttttatgacagctcttcgtagaaaatatctgcaaaatggtaaa
tcattatctaagtcttatggattaagtaatttacttgattttgttgcaattggtacagtt
gcagactgtgttagtatggcaaatagtcataataaccgtattgttacaaaactaggtata
gagcaacttaagaataacgatcgtctatgttgggacttcttagataaagagaaactatca
agtgagtatattagtttcagtatagctcccttgctaaatagtgatggaagagtttctgat
gcactagggtctgttagctttttgcttgagaatgatgaacgcaaaattgaagaaacgtac
gaaaacctaactaaacaaaatagccaacgtaaagaaattcaaaaaaagcttactcatgaa
gcaataaccaaagcatatcaattagacaatgatagcaactcactatgtatattacttgat
gatggccactctggaattcatggtattacagcaagtagagtcaaagaaatgtttggtaag
cctgtgattattttttctgaaacacaaaatgatcctaacttaatatcaggttctgctagg
agtgtagatagtattaatattaaaacaatacttgatactatagcacttaaatcgcctgct
ttaatgataaaatatggtggtcataaaggtgctgcgggcttaacaataaacaaatctgat
ttcgatactttttatgatttatttgaaagtgaaattatcaatttcattaaaaatgatagt
atatctttagagcctattttagagtatgattttgaacttgatgaaaatgatttcaaacta
caaactctagaaaagatagaatctcttgaaccatttggtagagaatttgaaaaaccacta
ttttacaacagttttactatagagaatctacgtttagttggtaaagataaaaatcatgcc
caactaattttacgctataaaaatattccttcaatcaaagcgatatggtttaatgcctta
gaaaataaaataattgaacaaataggtattggcgataccataagagcctgttatgaactt
caaaaagaagaattcctcgggcagacaaacttatctctcaatattaaacttatcgaaaaa
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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