KEGG   Fictibacillus phosphorivorans: ABE65_008880
Entry
ABE65_008880      CDS       T04282                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
fpn  Fictibacillus phosphorivorans
Pathway
fpn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fpn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABE65_008880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpn03019]
    ABE65_008880
   03016 Transfer RNA biogenesis [BR:fpn03016]
    ABE65_008880
Enzymes [BR:fpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     ABE65_008880
Messenger RNA biogenesis [BR:fpn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ABE65_008880
Transfer RNA biogenesis [BR:fpn03016]
 Prokaryotic type
  tRNA degradation factors
   ABE65_008880
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 ATP-grasp SPATA25 S1_2 KH_5
Other DBs
NCBI-ProteinID: ANC76910
UniProt: A0A160IMI2
Position
1727454..1729568
AA seq 704 aa
MDQQKRTFTMDWAGRTLTFEIGELAKQANGAVMVRYGDTAVLSTAVASKQPKNLSFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVVSTVMSV
DQNCSSEMAAMIGSSLALSISDIPFEGPIAGVTVGRIEGEFVINPTVEQNEKSDIQLIVA
GTKHAINMVEAGAEEVSEEVMLEAIMFGHEEIKRLIAFQEEIVSEIGKEKMEIVLHELDK
DVEQEVREFVGNDVKEAVKVVEKHARQEALDAVSANVASRYEEDEDKASEAKEVLHKLIK
EEVRRLILKEKVRPDGRKTDEIRQLSSKVGILARTHGSGLFTRGQTQALSICTLGALGDV
QVLDGLGVEESKRFMHQYNFPPFSVGETGFMRGPGRREIGHGALGERALEQVIPNEEEFP
YTIRLVSEVLESNGSTSQASICASTLALMDAGVPIKAPVAGIAMGLISDGEDVTVLTDIQ
GMEDHLGDMDFKVAGTPNGITALQMDIKISGINREILQEALTQAKEGRMIILKSMLATLS
ESRTQLSQYAPKILTMKINPDKIRDVIGPSGKIINKIIEETGVKIDIEQDGTVFIASTDE
PMNKKAKKIIEDIVREVQAGEYYMGKVKRIEKFGAFVELFSGKDGLVHISELAEERVGKV
EDVLKLGDEIMVKVMEIDNQGRVNLSRKVVLKEEKAKNEQQQNA
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggatcaacaaaaaagaacttttacaatggactgggcgggtagaacgcttacgttcgaa
attggagaattagcaaaacaagcaaatggtgctgtaatggtcagatatggcgatactgca
gtgctttcaacagctgttgcatcaaaacagcctaaaaaccttagtttctttccgctgaca
gtaaactacgaagagcgtttatatgcagttggtaaaattccaggtggatttattaaacgt
gaaggacgtccaagcgaaaaagctgtattggcgagtcgtttgatcgaccgtcctattcgt
cctctattcgcagatggtttccgtaacgaagtacaagttgtcagcactgtaatgagtgta
gatcaaaactgttcttcagaaatggctgcgatgatcggatcatcacttgcgttgtctatt
tcagatattccttttgaaggaccgatcgctggagttaccgttggtcgaatcgaaggcgaa
tttgtgatcaatccaacggttgagcaaaatgaaaaaagtgatattcaattaattgttgcg
ggtactaaacatgccatcaacatggttgaagctggtgcagaagaagtttctgaagaagtg
atgcttgaagcgatcatgttcggtcatgaagagatcaagcgcttaatcgctttccaagaa
gagattgtttctgaaatcggtaaagaaaagatggagattgttcttcatgagctagataaa
gatgttgaacaagaagttcgtgaatttgttggaaacgatgtgaaagaagcagttaaggtt
gttgaaaagcatgctcgtcaagaagctttagacgctgtaagtgccaacgtcgcttctcgt
tacgaagaagatgaagataaagccagcgaagcaaaagaggttttacataaactcatcaaa
gaagaagtacgacgcttgatcctgaaggaaaaagttcgtccggatggaaggaaaacagat
gaaatccgtcaactttcttcaaaagtaggcattttagcaagaacgcatggttcaggtcta
tttacacgtgggcaaacacaagcgctcagcatctgtacattaggtgctcttggcgacgtt
caagttctagatggccttggagtggaagagtcaaaacgtttcatgcatcaatataatttc
cctccattcagtgtaggtgaaactgggtttatgcgtggaccaggtagacgtgaaatcgga
catggtgcactcggtgaacgtgctttagagcaagtgattccgaacgaagaagagttccca
tacacgattcgtctcgtttcagaagtattagaatccaacggttctacatcacaagctagt
atttgtgcaagtacgcttgcattgatggatgctggtgtaccgatcaaagctcctgttgca
ggtattgcgatgggtctgatctctgacggtgaagatgtaacggtgttaacggatattcaa
ggcatggaagatcatcttggcgatatggactttaaagtggcaggaactcctaacgggatc
actgctcttcagatggacattaaaatttcaggaattaatcgtgaaattcttcaagaagct
ttaacacaagcaaaagaaggacgtatgatcatcctaaagtctatgcttgctacactttca
gaatctcgtactcaactttctcaatatgctcctaagatcttaacaatgaagatcaatccg
gataagatccgtgatgtaatcgggccgagcggcaagatcatcaacaagatcattgaagaa
acgggtgttaagattgatatcgagcaagatggtacagtcttcatcgcttcaactgacgaa
cctatgaacaaaaaagcgaagaaaatcattgaagatattgttcgtgaagttcaagcaggt
gagtactacatgggcaaagttaaacgtatcgaaaagtttggtgcgtttgtagaactattc
agtggtaaagatggactcgttcatatctctgaacttgctgaagaacgtgtaggaaaagtt
gaagatgtactaaagcttggtgacgagatcatggttaaagtaatggagatcgacaatcaa
ggtcgtgttaacttatctcgtaaagttgtactaaaagaagaaaaagcaaagaatgaacag
caacaaaatgcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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