KEGG   Frischella perrara: FPB0191_00905
Entry
FPB0191_00905     CDS       T03525                                 
Name
(GenBank) DNA topoisomerase I, bacterial
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
fpp  Frischella perrara
Brite
KEGG Orthology (KO) [BR:fpp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpp03032]
    FPB0191_00905
   03400 DNA repair and recombination proteins [BR:fpp03400]
    FPB0191_00905
Enzymes [BR:fpp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     FPB0191_00905
DNA replication proteins [BR:fpp03032]
 Prokaryotic type
  DNA Topoisomerases
   FPB0191_00905
DNA repair and recombination proteins [BR:fpp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FPB0191_00905
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF zf-C4_Topoisom Toprim Zn_ribbon_recom Toprim_2 Toprim_4 zf-TFIIB
Other DBs
NCBI-ProteinID: AJA44731
UniProt: A0A0A7S616
Position
1015950..1018574
AA seq 874 aa
MGKSLVIVESPAKAKTINKYLGKDYIVKSSIGHIRDLPVSGNKTTETSDENKTELKKEGN
KKVKRSSQQILVDRMGVDPYHDWKANYQILPGKSKVVAELKKLAKDADTVYLATDLDREG
EAIAWHLKEVIGGDDDKYRRVVFNEITKTAIQNAFKQPGFLDINRVNAQQARRFMDRVVG
FMLSPLLWKKVARGLSAGRVQSVAVRLLVEREREIHAFIPQEYWDLFADVKTQSNHTLTM
QVTHFAGETFEPKDRIAIDMALKELNESQYQIQNIEEKPTKSNPTAPFITSTLQQAASTR
LGFGVKKTMTLAQRLYEAGYITYMRTDSTNLSQDAISMVRGYIEKEFGEKYLPTKANIYT
SKQNSQEAHEAIRPSDVKLIAEKLNEIESDARKLYHLIWCQFVACQMTAAEYNLTTITAQ
AGNFTLKAKGRVLRFDGWTRVQPQLLKNNDDKILPTVKEKELLDLLALNPVQHFTKPPAR
YNEASLVRELEKRGIGRPSTYATIISTIQDRGYVRLENRRFYAEKIGEIVTDRLGENFND
LMSYDFTARMEDTLDDVAHKKIDWKNVLDSFFSNFSKHLEQAEQAPDKGGMQLNPLVPTP
EIKCPACGREMGIKTASTGVFLACSGYSLPPKERCKQTINLIPEHEIINLLEDGSDTSSA
ETDALRARKRCPKCHTAMDSYILDGNHKLHICGNNPICDGFIVEEGNFKIKTYEGPIIEC
EKCGSEMHLKTGRFGIYMGCTNPECKNTRKILKNGDVAPPKEDPVDLPELKCSKSDAHFV
LRDGASGIFLAAHNFPKSRETRAPLVAELQQFKDRLPEKFLYLTQAPAIDPDGNNAIVRF
SRKNKQQYVTSEVNGKSTGWVMNFIDGKWVKTSK
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgggaaaatccctcgttattgtggaatcaccagcaaaagcaaaaacaattaataaatat
ttgggtaaagattatattgttaaatcaagtataggccatatacgtgatttacccgttagt
ggtaataagaccaccgaaacaagcgatgaaaataagacagaattaaaaaaagaaggtaat
aaaaaagtaaaacgctcatctcaacagatattagtcgatagaatgggcgttgatccgtac
catgattggaaagcaaattatcagattttgccggggaaaagcaaagtcgttgccgaatta
aagaagttagcaaaagatgccgatacagtttaccttgcgaccgacttggatagagaaggg
gaagccattgcttggcatttaaaagaagtaattggtggtgatgacgataaatatcgacga
gttgtatttaatgaaattaccaaaacagctattcaaaatgcttttaaacaacctggattt
ttagatattaatcgagttaatgctcaacaagctcgccgttttatggatcgggtagttgga
tttatgctatcgccattgttatggaaaaaagtggcacgtggcttatcagcaggacgagtt
cagtcagttgcagtcagattattagtagaacgtgaacgtgaaattcatgcttttattcca
caagaatattgggatctttttgctgatgtaaaaactcaatctaatcatactctcactatg
caagtaactcattttgctggtgaaacatttgaaccgaaagatcgtatagcaattgatatg
gctttaaaagagttaaatgaaagccaatatcaaatacaaaatattgaagaaaaaccaaca
aaaagtaatccgactgcaccgtttattacttcgacattacaacaagctgcaagcacccga
cttggatttggcgttaaaaagaccatgacattagcacaacgtctttatgaagcaggttat
attacctatatgcgtactgactcaaccaatttaagtcaagacgcaataagtatggtaaga
gggtatattgagaaggaatttggtgaaaaatatttaccgacaaaagcaaatatttatacc
agcaagcaaaactcacaagaagcacatgaggcaattcgaccatcagatgtcaaacttatt
gctgaaaagttaaatgaaatagagtcagatgcacgcaaattatatcatctcatttggtgc
caatttgttgcatgccaaatgacggcagcagaatacaatttaactacaattaccgcccaa
gcgggtaatttcacattaaaagcaaaaggtcgtgttttacgctttgatggttggacgcgg
gttcagccacaattgctaaaaaataatgatgataaaatactgccaacagttaaagaaaaa
gaacttcttgatttgttggcattaaatccagtacaacatttcactaaaccaccggctcgt
tacaatgaagcctctttggtgcgtgagctagaaaaacgaggtattggtcgaccatccacc
tatgcaacaattatttctacgattcaagatcgaggttatgtgcgtttagaaaatagacgt
ttctatgctgaaaaaattggtgaaatcgtcacggatcgtttaggtgagaattttaatgat
cttatgagttatgattttacggctcgtatggaagatacgcttgatgatgttgcacataaa
aaaattgattggaaaaatgttttagattcatttttctctaatttttctaagcatctggaa
caagcggaacaagcgccagacaagggtggcatgcaattaaatcctcttgttccaacaccg
gaaattaaatgtccagcatgtggaagagaaatgggaattaaaacagccagtactggtgtc
tttttagcttgttctggttacagtttgccgcctaaagagcgttgtaagcaaaccattaat
ttaattcctgaacatgagataattaatctgcttgaagatggaagcgatactagcagtgcc
gaaaccgatgccttaagagcacgtaagcgttgtcctaaatgtcatactgcaatggatagt
tatatactagatggtaatcataaattacatatttgtggtaataacccaatttgcgatggc
tttatcgttgaagaaggtaatttcaaaattaaaacctatgaaggcccgatcattgaatgc
gaaaaatgtggaagtgagatgcatttaaaaacaggccgatttggtatttacatgggttgt
acaaatccagaatgtaaaaatacccgtaaaattctaaaaaatggtgatgtagcgccgcca
aaagaagatcctgttgatttaccagaattaaaatgtagcaaatcagatgcacattttgta
ttacgtgatggtgcatcaggtattttcttagcagcccataattttcctaaatctcgtgaa
acacgagccccattagttgccgaattacagcaattcaaggatcgtttaccagaaaaattc
ttgtatttaacacaggcaccagccattgaccccgatggtaataatgcgattgtacggttt
agtagaaaaaacaaacagcaatatgtgacttcggaagttaatggtaaatcaacgggttgg
gtaatgaatttcattgatggtaaatgggtcaaaaccagtaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (31)   

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